Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rai1Q61818 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Gm11380-201ENSMUST00000118067 560 ntBASIC10.85□□□□□ -0.67
Rai1Q61818 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.85□□□□□ -0.67
Rai1Q61818 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.85□□□□□ -0.67
Rai1Q61818 Gm11993-201ENSMUST00000121861 820 ntBASIC10.85□□□□□ -0.67
Rai1Q61818 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC10.85□□□□□ -0.67
Rai1Q61818 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC10.85□□□□□ -0.67
Rai1Q61818 Gm9625-201ENSMUST00000180422 955 ntBASIC10.85□□□□□ -0.67
Rai1Q61818 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.85□□□□□ -0.67
Rai1Q61818 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.85□□□□□ -0.67
Rai1Q61818 Gm7880-201ENSMUST00000203748 871 ntBASIC10.85□□□□□ -0.67
Rai1Q61818 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.85□□□□□ -0.67
Rai1Q61818 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rai1Q61818 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.85□□□□□ -0.67
Rai1Q61818 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rai1Q61818 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rai1Q61818 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Rai1Q61818 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rai1Q61818 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Rai1Q61818 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.85□□□□□ -0.67
Rai1Q61818 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Gm20493-201ENSMUST00000173706 213 ntBASIC10.85□□□□□ -0.67
Rai1Q61818 Gm8234-201ENSMUST00000198523 1107 ntBASIC10.85□□□□□ -0.67
Rai1Q61818 Gm44498-201ENSMUST00000199509 111 ntBASIC10.85□□□□□ -0.67
Rai1Q61818 Gm26782-203ENSMUST00000227103 751 ntBASIC10.85□□□□□ -0.67
Rai1Q61818 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Rai1Q61818 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rai1Q61818 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rai1Q61818 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rai1Q61818 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.84□□□□□ -0.67
Rai1Q61818 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.84□□□□□ -0.67
Rai1Q61818 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Rai1Q61818 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rai1Q61818 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.84□□□□□ -0.67
Rai1Q61818 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.84□□□□□ -0.67
Rai1Q61818 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.84□□□□□ -0.67
Rai1Q61818 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC10.84□□□□□ -0.67
Rai1Q61818 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC10.84□□□□□ -0.67
Rai1Q61818 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC10.84□□□□□ -0.67
Rai1Q61818 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC10.84□□□□□ -0.67
Rai1Q61818 Gm42732-201ENSMUST00000202887 1197 ntBASIC10.84□□□□□ -0.67
Rai1Q61818 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC10.84□□□□□ -0.67
Rai1Q61818 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC10.84□□□□□ -0.67
Rai1Q61818 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.84□□□□□ -0.67
Rai1Q61818 AC105408.1-201ENSMUST00000227771 802 ntBASIC10.84□□□□□ -0.67
Rai1Q61818 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.84□□□□□ -0.67
Rai1Q61818 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.84□□□□□ -0.67
Rai1Q61818 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rai1Q61818 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms