Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.59□□□□□ -0.71
Sox17Q61473 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sox17Q61473 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Sox17Q61473 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.59□□□□□ -0.71
Sox17Q61473 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Sox17Q61473 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Gm15370-201ENSMUST00000117158 253 ntBASIC10.59□□□□□ -0.71
Sox17Q61473 Gm11660-201ENSMUST00000120955 412 ntBASIC10.59□□□□□ -0.71
Sox17Q61473 Gm15547-201ENSMUST00000122152 333 ntBASIC10.59□□□□□ -0.71
Sox17Q61473 Gm13786-201ENSMUST00000122371 333 ntBASIC10.59□□□□□ -0.71
Sox17Q61473 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.59□□□□□ -0.71
Sox17Q61473 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
Sox17Q61473 Gm26956-201ENSMUST00000182176 986 ntBASIC10.59□□□□□ -0.71
Sox17Q61473 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Gm37489-201ENSMUST00000191883 159 ntBASIC10.59□□□□□ -0.71
Sox17Q61473 Gm43962-201ENSMUST00000203898 190 ntBASIC10.59□□□□□ -0.71
Sox17Q61473 Rps4l-202ENSMUST00000204242 789 ntBASIC10.59□□□□□ -0.71
Sox17Q61473 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.59□□□□□ -0.71
Sox17Q61473 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Sox17Q61473 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Sox17Q61473 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.59□□□□□ -0.71
Sox17Q61473 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.59□□□□□ -0.71
Sox17Q61473 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sox17Q61473 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sox17Q61473 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sox17Q61473 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Sox17Q61473 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox17Q61473 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Sox17Q61473 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sox17Q61473 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sox17Q61473 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Sox17Q61473 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
Sox17Q61473 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.58□□□□□ -0.72
Sox17Q61473 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.58□□□□□ -0.72
Sox17Q61473 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Gm5187-201ENSMUST00000117317 991 ntBASIC10.58□□□□□ -0.72
Sox17Q61473 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Sox17Q61473 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.58□□□□□ -0.72
Sox17Q61473 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.58□□□□□ -0.72
Sox17Q61473 Gm44008-201ENSMUST00000204345 412 ntBASIC10.58□□□□□ -0.72
Sox17Q61473 Gm45598-202ENSMUST00000210719 986 ntBASIC10.58□□□□□ -0.72
Sox17Q61473 Gm45880-201ENSMUST00000213041 853 ntBASIC10.58□□□□□ -0.72
Sox17Q61473 Gm7940-201ENSMUST00000218195 769 ntBASIC10.58□□□□□ -0.72
Sox17Q61473 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.58□□□□□ -0.72
Sox17Q61473 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Sox17Q61473 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Sox17Q61473 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.58□□□□□ -0.72
Sox17Q61473 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Sox17Q61473 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Sox17Q61473 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.58□□□□□ -0.72
Sox17Q61473 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox17Q61473 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms