Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.92□□□□□ -0.66
ClpbQ60649 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
ClpbQ60649 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
ClpbQ60649 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.92□□□□□ -0.66
ClpbQ60649 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.92□□□□□ -0.66
ClpbQ60649 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.92□□□□□ -0.66
ClpbQ60649 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Gm14193-201ENSMUST00000105067 153 ntBASIC10.92□□□□□ -0.66
ClpbQ60649 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.92□□□□□ -0.66
ClpbQ60649 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.92□□□□□ -0.66
ClpbQ60649 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.92□□□□□ -0.66
ClpbQ60649 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.92□□□□□ -0.66
ClpbQ60649 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
ClpbQ60649 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.92□□□□□ -0.66
ClpbQ60649 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
ClpbQ60649 Gm9540-201ENSMUST00000188230 478 ntBASIC10.92□□□□□ -0.66
ClpbQ60649 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
ClpbQ60649 Gm17831-201ENSMUST00000205579 900 ntBASIC10.92□□□□□ -0.66
ClpbQ60649 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
ClpbQ60649 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.92□□□□□ -0.66
ClpbQ60649 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.92□□□□□ -0.66
ClpbQ60649 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
ClpbQ60649 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
ClpbQ60649 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
ClpbQ60649 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.92□□□□□ -0.66
ClpbQ60649 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.91□□□□□ -0.66
ClpbQ60649 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.91□□□□□ -0.66
ClpbQ60649 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
ClpbQ60649 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
ClpbQ60649 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.91□□□□□ -0.66
ClpbQ60649 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.91□□□□□ -0.66
ClpbQ60649 Gm15573-201ENSMUST00000119487 540 ntBASIC10.91□□□□□ -0.66
ClpbQ60649 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Gm15881-201ENSMUST00000148792 942 ntBASIC10.91□□□□□ -0.66
ClpbQ60649 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.91□□□□□ -0.66
ClpbQ60649 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Mir6546-201ENSMUST00000184460 62 ntBASIC10.91□□□□□ -0.66
ClpbQ60649 Gm7467-201ENSMUST00000185173 652 ntBASIC10.91□□□□□ -0.66
ClpbQ60649 Gm5982-201ENSMUST00000196234 512 ntBASIC10.91□□□□□ -0.66
ClpbQ60649 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.91□□□□□ -0.66
ClpbQ60649 Gm45113-201ENSMUST00000207518 165 ntBASIC10.91□□□□□ -0.66
ClpbQ60649 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
ClpbQ60649 Gm9132-201ENSMUST00000210182 832 ntBASIC10.91□□□□□ -0.66
ClpbQ60649 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.91□□□□□ -0.66
ClpbQ60649 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
ClpbQ60649 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms