Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 AC153380.1-201ENSMUST00000214959 2364 ntBASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Gm19246-201ENSMUST00000173599 255 ntBASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Gm43058-201ENSMUST00000197645 625 ntBASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Gm45594-201ENSMUST00000211717 241 ntBASIC13.59□□□□□ -0.23
Vps54Q5SPW0 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps54Q5SPW0 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Vps54Q5SPW0 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.58□□□□□ -0.23
Vps54Q5SPW0 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vps54Q5SPW0 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Vps54Q5SPW0 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Vps54Q5SPW0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Gm9133-201ENSMUST00000118289 540 ntBASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Gm15744-201ENSMUST00000161734 213 ntBASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Gm43380-201ENSMUST00000200421 220 ntBASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Gm39288-201ENSMUST00000210554 446 ntBASIC13.58□□□□□ -0.24
Vps54Q5SPW0 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Gm23680-201ENSMUST00000083162 164 ntBASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms