Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Gria4-201ENSMUST00000027020 5441 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Gm36638-202ENSMUST00000192073 2169 ntBASIC9.29□□□□□ -0.92
Trim63Q38HM4 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Dhx30-219ENSMUST00000199529 4373 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Gm9860-201ENSMUST00000211426 3653 ntBASIC9.28□□□□□ -0.92
Trim63Q38HM4 Pygm-202ENSMUST00000113483 2583 ntTSL 5 BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Cntrob-201ENSMUST00000092973 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Trim63Q38HM4 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.28□□□□□ -0.92
Trim63Q38HM4 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Gm14350-201ENSMUST00000116642 640 ntBASIC9.28□□□□□ -0.92
Trim63Q38HM4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC9.28□□□□□ -0.92
Trim63Q38HM4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC9.28□□□□□ -0.92
Trim63Q38HM4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.28□□□□□ -0.92
Trim63Q38HM4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC9.28□□□□□ -0.92
Trim63Q38HM4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Gm29541-201ENSMUST00000191351 678 ntBASIC9.28□□□□□ -0.92
Trim63Q38HM4 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Gm6007-201ENSMUST00000208170 823 ntBASIC9.28□□□□□ -0.92
Trim63Q38HM4 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Shd-206ENSMUST00000225145 998 ntBASIC9.28□□□□□ -0.92
Trim63Q38HM4 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.28□□□□□ -0.92
Trim63Q38HM4 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC9.28□□□□□ -0.92
Trim63Q38HM4 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Pcdhga5-201ENSMUST00000193414 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim63Q38HM4 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trim63Q38HM4 Atg7-201ENSMUST00000032457 3761 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trim63Q38HM4 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Trim63Q38HM4 Mtor-202ENSMUST00000103221 8564 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trim63Q38HM4 Anapc1-203ENSMUST00000110333 4214 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Trim63Q38HM4 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Trim63Q38HM4 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Trim63Q38HM4 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Disp1-202ENSMUST00000171366 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Traf7-215ENSMUST00000176652 3003 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.27□□□□□ -0.93
Trim63Q38HM4 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Mov10-207ENSMUST00000168015 3460 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Gm37731-201ENSMUST00000194545 2237 ntBASIC9.27□□□□□ -0.93
Trim63Q38HM4 Chrm1-201ENSMUST00000035444 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 AC154171.3-201ENSMUST00000224519 2505 ntBASIC9.27□□□□□ -0.93
Trim63Q38HM4 Plekha6-202ENSMUST00000105082 7085 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Gm11573-201ENSMUST00000119956 394 ntBASIC9.27□□□□□ -0.93
Trim63Q38HM4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Gm16296-201ENSMUST00000159905 325 ntBASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms