Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Col8a1Q00780 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.76□□□□□ -0.85
Col8a1Q00780 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.76□□□□□ -0.85
Col8a1Q00780 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.76□□□□□ -0.85
Col8a1Q00780 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.76□□□□□ -0.85
Col8a1Q00780 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 AC137950.2-202ENSMUST00000227150 1635 ntBASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.75□□□□□ -0.85
Col8a1Q00780 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
Col8a1Q00780 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Smok4a-201ENSMUST00000074512 1455 ntBASIC9.75□□□□□ -0.85
Col8a1Q00780 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm17221-201ENSMUST00000163909 481 ntBASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm17073-201ENSMUST00000168069 556 ntBASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm5335-201ENSMUST00000182995 1000 ntBASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm8756-201ENSMUST00000183250 929 ntBASIC9.75□□□□□ -0.85
Col8a1Q00780 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm6606-201ENSMUST00000193613 947 ntBASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm37452-201ENSMUST00000194416 1160 ntBASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm7238-201ENSMUST00000206467 973 ntBASIC9.75□□□□□ -0.85
Col8a1Q00780 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC9.75□□□□□ -0.85
Col8a1Q00780 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.75□□□□□ -0.85
Col8a1Q00780 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.75□□□□□ -0.85
Col8a1Q00780 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Col8a1Q00780 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a1Q00780 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col8a1Q00780 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.74□□□□□ -0.85
Col8a1Q00780 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Col8a1Q00780 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col8a1Q00780 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Col8a1Q00780 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Col8a1Q00780 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Col8a1Q00780 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col8a1Q00780 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.74□□□□□ -0.85
Col8a1Q00780 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col8a1Q00780 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col8a1Q00780 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col8a1Q00780 Nupl1-206ENSMUST00000225111 2936 ntBASIC9.74□□□□□ -0.85
Col8a1Q00780 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col8a1Q00780 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Col8a1Q00780 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col8a1Q00780 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC9.74□□□□□ -0.85
Col8a1Q00780 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.74□□□□□ -0.85
Col8a1Q00780 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col8a1Q00780 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.74□□□□□ -0.85
Col8a1Q00780 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Col8a1Q00780 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col8a1Q00780 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms