Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim43cP86449 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim43cP86449 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim43cP86449 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim43cP86449 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim43cP86449 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Trim43cP86449 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim43cP86449 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Trim43cP86449 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trim43cP86449 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim43cP86449 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Trim43cP86449 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.36□□□□□ -0.43
Trim43cP86449 Gm9089-201ENSMUST00000122027 526 ntBASIC12.36□□□□□ -0.43
Trim43cP86449 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim43cP86449 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.36□□□□□ -0.43
Trim43cP86449 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim43cP86449 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim43cP86449 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim43cP86449 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim43cP86449 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim43cP86449 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim43cP86449 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim43cP86449 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.36□□□□□ -0.43
Trim43cP86449 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.36□□□□□ -0.43
Trim43cP86449 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Trim43cP86449 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43cP86449 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trim43cP86449 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim43cP86449 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim43cP86449 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trim43cP86449 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trim43cP86449 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim43cP86449 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim43cP86449 Gm8111-201ENSMUST00000117659 987 ntBASIC12.35□□□□□ -0.43
Trim43cP86449 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.35□□□□□ -0.43
Trim43cP86449 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.35□□□□□ -0.43
Trim43cP86449 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Gm24992-201ENSMUST00000157412 130 ntBASIC12.35□□□□□ -0.43
Trim43cP86449 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Gm16570-201ENSMUST00000161951 436 ntBASIC12.35□□□□□ -0.43
Trim43cP86449 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim43cP86449 Gm19246-201ENSMUST00000173599 255 ntBASIC12.35□□□□□ -0.43
Trim43cP86449 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Gm30946-201ENSMUST00000198288 724 ntBASIC12.35□□□□□ -0.43
Trim43cP86449 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim43cP86449 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.35□□□□□ -0.43
Trim43cP86449 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.35□□□□□ -0.43
Trim43cP86449 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim43cP86449 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Trim43cP86449 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.35□□□□□ -0.43
Trim43cP86449 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.35□□□□□ -0.43
Trim43cP86449 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trim43cP86449 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43cP86449 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim43cP86449 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms