Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Shox2P70390 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Shox2P70390 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Shox2P70390 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Shox2P70390 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Shox2P70390 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Shox2P70390 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Shox2P70390 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Gm11660-201ENSMUST00000120955 412 ntBASIC11.17□□□□□ -0.62
Shox2P70390 Gm25261-201ENSMUST00000157416 134 ntBASIC11.17□□□□□ -0.62
Shox2P70390 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Gm27486-201ENSMUST00000184923 80 ntBASIC11.17□□□□□ -0.62
Shox2P70390 Gm27892-201ENSMUST00000185017 106 ntBASIC11.17□□□□□ -0.62
Shox2P70390 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.17□□□□□ -0.62
Shox2P70390 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.17□□□□□ -0.62
Shox2P70390 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.17□□□□□ -0.62
Shox2P70390 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.17□□□□□ -0.62
Shox2P70390 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Shox2P70390 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Shox2P70390 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Shox2P70390 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Shox2P70390 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC11.17□□□□□ -0.62
Shox2P70390 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Shox2P70390 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Shox2P70390 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Shox2P70390 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shox2P70390 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Shox2P70390 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Shox2P70390 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Shox2P70390 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
Shox2P70390 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Gm16379-201ENSMUST00000161469 348 ntBASIC11.16□□□□□ -0.62
Shox2P70390 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Gm28746-201ENSMUST00000187453 380 ntBASIC11.16□□□□□ -0.62
Shox2P70390 Gm9230-201ENSMUST00000188228 532 ntBASIC11.16□□□□□ -0.62
Shox2P70390 Gm8762-201ENSMUST00000193486 339 ntBASIC11.16□□□□□ -0.62
Shox2P70390 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Shox2P70390 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.16□□□□□ -0.62
Shox2P70390 Gm2553-201ENSMUST00000215986 605 ntBASIC11.16□□□□□ -0.62
Shox2P70390 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.16□□□□□ -0.62
Shox2P70390 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Shox2P70390 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shox2P70390 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.16□□□□□ -0.62
Shox2P70390 Gm10417-201ENSMUST00000194341 3522 ntBASIC11.15□□□□□ -0.62
Shox2P70390 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Shox2P70390 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Shox2P70390 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.15□□□□□ -0.62
Shox2P70390 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Shox2P70390 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Shox2P70390 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Shox2P70390 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Shox2P70390 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.15□□□□□ -0.62
Shox2P70390 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC11.15□□□□□ -0.62
Shox2P70390 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.15□□□□□ -0.62
Shox2P70390 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC11.15□□□□□ -0.62
Shox2P70390 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms