Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Tpm1P58771 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.64□□□□□ -0.39
Tpm1P58771 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Gm11222-201ENSMUST00000119005 738 ntBASIC12.64□□□□□ -0.39
Tpm1P58771 Gm6963-201ENSMUST00000147879 379 ntBASIC12.64□□□□□ -0.39
Tpm1P58771 Mir1982-201ENSMUST00000157368 74 ntBASIC12.64□□□□□ -0.39
Tpm1P58771 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.64□□□□□ -0.39
Tpm1P58771 Gm6450-201ENSMUST00000200896 574 ntBASIC12.64□□□□□ -0.39
Tpm1P58771 Gm43962-201ENSMUST00000203898 190 ntBASIC12.64□□□□□ -0.39
Tpm1P58771 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Gm45598-202ENSMUST00000210719 986 ntBASIC12.64□□□□□ -0.39
Tpm1P58771 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.64□□□□□ -0.39
Tpm1P58771 Gm5705-201ENSMUST00000066241 711 ntBASIC12.64□□□□□ -0.39
Tpm1P58771 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Tpm1P58771 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.64□□□□□ -0.39
Tpm1P58771 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Tpm1P58771 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.64□□□□□ -0.39
Tpm1P58771 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC12.64□□□□□ -0.39
Tpm1P58771 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.64□□□□□ -0.39
Tpm1P58771 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.64□□□□□ -0.39
Tpm1P58771 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.63□□□□□ -0.39
Tpm1P58771 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tpm1P58771 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.63□□□□□ -0.39
Tpm1P58771 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.63□□□□□ -0.39
Tpm1P58771 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.63□□□□□ -0.39
Tpm1P58771 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.63□□□□□ -0.39
Tpm1P58771 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Gm15370-201ENSMUST00000117158 253 ntBASIC12.63□□□□□ -0.39
Tpm1P58771 Gm5187-201ENSMUST00000117317 991 ntBASIC12.63□□□□□ -0.39
Tpm1P58771 Gm11425-201ENSMUST00000119608 498 ntBASIC12.63□□□□□ -0.39
Tpm1P58771 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Tpm1P58771 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.63□□□□□ -0.39
Tpm1P58771 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.63□□□□□ -0.39
Tpm1P58771 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.63□□□□□ -0.39
Tpm1P58771 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Tpm1P58771 Gm9396-201ENSMUST00000076703 567 ntBASIC12.63□□□□□ -0.39
Tpm1P58771 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC12.63□□□□□ -0.39
Tpm1P58771 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC12.63□□□□□ -0.39
Tpm1P58771 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.63□□□□□ -0.39
Tpm1P58771 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tpm1P58771 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm1P58771 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 CT868720.1-201ENSMUST00000223069 2544 ntBASIC12.62□□□□□ -0.39
Tpm1P58771 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Tpm1P58771 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Tpm1P58771 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Tpm1P58771 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC12.62□□□□□ -0.39
Tpm1P58771 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Tpm1P58771 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.62□□□□□ -0.39
Tpm1P58771 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Tpm1P58771 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms