Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Atxn1P54254 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Atxn1P54254 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.34□□□□□ -0.59
Atxn1P54254 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Atxn1P54254 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Atxn1P54254 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Gm13286-201ENSMUST00000117750 537 ntBASIC11.34□□□□□ -0.59
Atxn1P54254 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC11.34□□□□□ -0.59
Atxn1P54254 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Atxn1P54254 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.34□□□□□ -0.59
Atxn1P54254 Gm9081-201ENSMUST00000182346 991 ntBASIC11.34□□□□□ -0.59
Atxn1P54254 Gm42599-201ENSMUST00000201308 469 ntBASIC11.34□□□□□ -0.59
Atxn1P54254 Gm44882-201ENSMUST00000205702 802 ntBASIC11.34□□□□□ -0.59
Atxn1P54254 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Atxn1P54254 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Atxn1P54254 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Atxn1P54254 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.34□□□□□ -0.59
Atxn1P54254 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.34□□□□□ -0.59
Atxn1P54254 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Atxn1P54254 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.34□□□□□ -0.59
Atxn1P54254 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atxn1P54254 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Atxn1P54254 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.33□□□□□ -0.6
Atxn1P54254 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Atxn1P54254 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.33□□□□□ -0.6
Atxn1P54254 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.6
Atxn1P54254 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Atxn1P54254 Gm24279-201ENSMUST00000104236 131 ntBASIC11.33□□□□□ -0.6
Atxn1P54254 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Gm25226-201ENSMUST00000158198 123 ntBASIC11.33□□□□□ -0.6
Atxn1P54254 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.33□□□□□ -0.6
Atxn1P54254 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Atxn1P54254 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Atxn1P54254 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Atxn1P54254 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.33□□□□□ -0.6
Atxn1P54254 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.33□□□□□ -0.6
Atxn1P54254 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Atxn1P54254 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.33□□□□□ -0.6
Atxn1P54254 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Atxn1P54254 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atxn1P54254 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.32□□□□□ -0.6
Atxn1P54254 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Atxn1P54254 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms