Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox3P53784 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sox3P53784 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.94□□□□□ -0.66
Sox3P53784 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Sox3P53784 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sox3P53784 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Sox3P53784 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.94□□□□□ -0.66
Sox3P53784 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Gm25076-201ENSMUST00000104098 132 ntBASIC10.94□□□□□ -0.66
Sox3P53784 Gm22711-201ENSMUST00000116890 133 ntBASIC10.94□□□□□ -0.66
Sox3P53784 Gm8731-201ENSMUST00000118088 412 ntBASIC10.94□□□□□ -0.66
Sox3P53784 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sox3P53784 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox3P53784 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.94□□□□□ -0.66
Sox3P53784 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC10.94□□□□□ -0.66
Sox3P53784 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.94□□□□□ -0.66
Sox3P53784 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.94□□□□□ -0.66
Sox3P53784 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.94□□□□□ -0.66
Sox3P53784 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.94□□□□□ -0.66
Sox3P53784 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.94□□□□□ -0.66
Sox3P53784 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Sox3P53784 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox3P53784 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Sox3P53784 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sox3P53784 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.93□□□□□ -0.66
Sox3P53784 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox3P53784 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox3P53784 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.93□□□□□ -0.66
Sox3P53784 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.93□□□□□ -0.66
Sox3P53784 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Sox3P53784 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox3P53784 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.93□□□□□ -0.66
Sox3P53784 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC10.93□□□□□ -0.66
Sox3P53784 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.93□□□□□ -0.66
Sox3P53784 Gm44958-201ENSMUST00000203734 736 ntBASIC10.93□□□□□ -0.66
Sox3P53784 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.93□□□□□ -0.66
Sox3P53784 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sox3P53784 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.93□□□□□ -0.66
Sox3P53784 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox3P53784 Gm9797-202ENSMUST00000218003 294 ntBASIC10.93□□□□□ -0.66
Sox3P53784 AC153962.2-201ENSMUST00000219417 550 ntBASIC10.93□□□□□ -0.66
Sox3P53784 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sox3P53784 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms