Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SftpbP50405 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
SftpbP50405 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SftpbP50405 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SftpbP50405 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.6□□□□□ -0.55
SftpbP50405 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SftpbP50405 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.6□□□□□ -0.55
SftpbP50405 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
SftpbP50405 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
SftpbP50405 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.59□□□□□ -0.55
SftpbP50405 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.59□□□□□ -0.55
SftpbP50405 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
SftpbP50405 Gm13350-201ENSMUST00000120519 479 ntBASIC11.59□□□□□ -0.55
SftpbP50405 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.59□□□□□ -0.55
SftpbP50405 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.59□□□□□ -0.55
SftpbP50405 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.59□□□□□ -0.55
SftpbP50405 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.59□□□□□ -0.55
SftpbP50405 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.59□□□□□ -0.55
SftpbP50405 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.59□□□□□ -0.55
SftpbP50405 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.59□□□□□ -0.55
SftpbP50405 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.59□□□□□ -0.55
SftpbP50405 Gm7003-201ENSMUST00000195089 312 ntBASIC11.59□□□□□ -0.55
SftpbP50405 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.59□□□□□ -0.55
SftpbP50405 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.59□□□□□ -0.55
SftpbP50405 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.59□□□□□ -0.55
SftpbP50405 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SftpbP50405 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
SftpbP50405 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.58□□□□□ -0.56
SftpbP50405 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Gm7150-201ENSMUST00000122032 981 ntBASIC11.58□□□□□ -0.56
SftpbP50405 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.58□□□□□ -0.56
SftpbP50405 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Gm25668-201ENSMUST00000157700 129 ntBASIC11.58□□□□□ -0.56
SftpbP50405 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SftpbP50405 Gm38151-201ENSMUST00000195085 289 ntBASIC11.58□□□□□ -0.56
SftpbP50405 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.58□□□□□ -0.56
SftpbP50405 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.58□□□□□ -0.56
SftpbP50405 Gm45575-201ENSMUST00000210283 548 ntBASIC11.58□□□□□ -0.56
SftpbP50405 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
SftpbP50405 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.58□□□□□ -0.56
SftpbP50405 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Gm4978-201ENSMUST00000071565 801 ntBASIC11.58□□□□□ -0.56
SftpbP50405 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
SftpbP50405 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SftpbP50405 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.58□□□□□ -0.56
SftpbP50405 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
SftpbP50405 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.58□□□□□ -0.56
SftpbP50405 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SftpbP50405 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
SftpbP50405 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms