Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ptx3P48759 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ptx3P48759 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ptx3P48759 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ptx3P48759 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ptx3P48759 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Ptx3P48759 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Ptx3P48759 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ptx3P48759 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Ptx3P48759 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ptx3P48759 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ptx3P48759 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ptx3P48759 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Ptx3P48759 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Ptx3P48759 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ptx3P48759 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ptx3P48759 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.64□□□□□ -0.71
Ptx3P48759 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Ptx3P48759 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.63□□□□□ -0.71
Ptx3P48759 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.63□□□□□ -0.71
Ptx3P48759 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.63□□□□□ -0.71
Ptx3P48759 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.63□□□□□ -0.71
Ptx3P48759 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Ptx3P48759 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.63□□□□□ -0.71
Ptx3P48759 Gm26013-201ENSMUST00000104404 119 ntBASIC10.63□□□□□ -0.71
Ptx3P48759 Gm16219-201ENSMUST00000120096 274 ntBASIC10.63□□□□□ -0.71
Ptx3P48759 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC10.63□□□□□ -0.71
Ptx3P48759 Gm13182-201ENSMUST00000122241 312 ntBASIC10.63□□□□□ -0.71
Ptx3P48759 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.63□□□□□ -0.71
Ptx3P48759 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.63□□□□□ -0.71
Ptx3P48759 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.63□□□□□ -0.71
Ptx3P48759 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.63□□□□□ -0.71
Ptx3P48759 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.63□□□□□ -0.71
Ptx3P48759 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.63□□□□□ -0.71
Ptx3P48759 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.63□□□□□ -0.71
Ptx3P48759 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.63□□□□□ -0.71
Ptx3P48759 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.63□□□□□ -0.71
Ptx3P48759 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Ptx3P48759 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Ptx3P48759 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Ptx3P48759 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.63□□□□□ -0.71
Ptx3P48759 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Gm44745-201ENSMUST00000206563 2723 ntBASIC10.63□□□□□ -0.71
Ptx3P48759 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ptx3P48759 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ptx3P48759 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ptx3P48759 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ptx3P48759 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ptx3P48759 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ptx3P48759 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ptx3P48759 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ptx3P48759 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ptx3P48759 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ptx3P48759 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Ptx3P48759 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Ptx3P48759 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.62□□□□□ -0.71
Ptx3P48759 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ptx3P48759 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ptx3P48759 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ptx3P48759 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ptx3P48759 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.62□□□□□ -0.71
Ptx3P48759 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ptx3P48759 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ptx3P48759 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms