Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prox1P48437 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prox1P48437 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prox1P48437 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.92□□□□□ -0.66
Prox1P48437 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prox1P48437 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prox1P48437 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.92□□□□□ -0.66
Prox1P48437 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Prox1P48437 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.92□□□□□ -0.66
Prox1P48437 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.92□□□□□ -0.66
Prox1P48437 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prox1P48437 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Prox1P48437 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Prox1P48437 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Prox1P48437 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.91□□□□□ -0.66
Prox1P48437 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Prox1P48437 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Prox1P48437 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Prox1P48437 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Prox1P48437 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Prox1P48437 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Prox1P48437 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.91□□□□□ -0.66
Prox1P48437 Gm11511-201ENSMUST00000118146 540 ntBASIC10.91□□□□□ -0.66
Prox1P48437 Gm11222-201ENSMUST00000119005 738 ntBASIC10.91□□□□□ -0.66
Prox1P48437 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Prox1P48437 Gm14381-201ENSMUST00000122105 414 ntBASIC10.91□□□□□ -0.66
Prox1P48437 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Gm26083-201ENSMUST00000157904 193 ntBASIC10.91□□□□□ -0.66
Prox1P48437 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.91□□□□□ -0.66
Prox1P48437 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.91□□□□□ -0.66
Prox1P48437 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Prox1P48437 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.91□□□□□ -0.66
Prox1P48437 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.91□□□□□ -0.66
Prox1P48437 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.91□□□□□ -0.66
Prox1P48437 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.91□□□□□ -0.66
Prox1P48437 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.91□□□□□ -0.66
Prox1P48437 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Prox1P48437 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.91□□□□□ -0.66
Prox1P48437 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Prox1P48437 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Prox1P48437 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Prox1P48437 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prox1P48437 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.9□□□□□ -0.66
Prox1P48437 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Prox1P48437 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Prox1P48437 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.9□□□□□ -0.66
Prox1P48437 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.9□□□□□ -0.66
Prox1P48437 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.9□□□□□ -0.66
Prox1P48437 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.9□□□□□ -0.66
Prox1P48437 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.9□□□□□ -0.66
Prox1P48437 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.9□□□□□ -0.66
Prox1P48437 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.9□□□□□ -0.66
Prox1P48437 Gm31256-201ENSMUST00000194705 506 ntBASIC10.9□□□□□ -0.66
Prox1P48437 Gm38314-201ENSMUST00000195709 625 ntBASIC10.9□□□□□ -0.66
Prox1P48437 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.9□□□□□ -0.66
Prox1P48437 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.9□□□□□ -0.66
Prox1P48437 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms