Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfx1P48377 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC13.53□□□□□ -0.24
Rfx1P48377 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rfx1P48377 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rfx1P48377 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rfx1P48377 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC13.53□□□□□ -0.24
Rfx1P48377 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Rfx1P48377 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Gm12241-201ENSMUST00000118330 726 ntBASIC13.53□□□□□ -0.24
Rfx1P48377 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC13.53□□□□□ -0.24
Rfx1P48377 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC13.53□□□□□ -0.24
Rfx1P48377 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rfx1P48377 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.53□□□□□ -0.24
Rfx1P48377 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.53□□□□□ -0.24
Rfx1P48377 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC13.53□□□□□ -0.24
Rfx1P48377 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.53□□□□□ -0.24
Rfx1P48377 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Rfx1P48377 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx1P48377 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC13.52□□□□□ -0.24
Rfx1P48377 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rfx1P48377 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.52□□□□□ -0.24
Rfx1P48377 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rfx1P48377 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rfx1P48377 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Rfx1P48377 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rfx1P48377 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rfx1P48377 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Rfx1P48377 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Gm22133-201ENSMUST00000102082 109 ntBASIC13.52□□□□□ -0.25
Rfx1P48377 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.52□□□□□ -0.25
Rfx1P48377 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.52□□□□□ -0.25
Rfx1P48377 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.52□□□□□ -0.25
Rfx1P48377 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC13.52□□□□□ -0.25
Rfx1P48377 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rfx1P48377 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Rfx1P48377 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rfx1P48377 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.52□□□□□ -0.25
Rfx1P48377 Gm9368-201ENSMUST00000219348 831 ntBASIC13.52□□□□□ -0.25
Rfx1P48377 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rfx1P48377 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Rfx1P48377 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.52□□□□□ -0.25
Rfx1P48377 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Rfx1P48377 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rfx1P48377 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx1P48377 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx1P48377 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx1P48377 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx1P48377 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rfx1P48377 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx1P48377 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.51□□□□□ -0.25
Rfx1P48377 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rfx1P48377 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx1P48377 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx1P48377 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx1P48377 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx1P48377 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx1P48377 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx1P48377 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx1P48377 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms