Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.21□□□□□ -0.62
Sox18P43680 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sox18P43680 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sox18P43680 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Sox18P43680 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.2□□□□□ -0.62
Sox18P43680 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.2□□□□□ -0.62
Sox18P43680 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sox18P43680 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.2□□□□□ -0.62
Sox18P43680 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.2□□□□□ -0.62
Sox18P43680 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Gm19210-201ENSMUST00000199562 1350 ntBASIC11.2□□□□□ -0.62
Sox18P43680 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Sox18P43680 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sox18P43680 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Gm11619-201ENSMUST00000117474 237 ntBASIC11.2□□□□□ -0.62
Sox18P43680 Gm5555-201ENSMUST00000120352 1111 ntBASIC11.2□□□□□ -0.62
Sox18P43680 Gm5392-201ENSMUST00000122189 789 ntBASIC11.2□□□□□ -0.62
Sox18P43680 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Sox18P43680 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.2□□□□□ -0.62
Sox18P43680 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC11.2□□□□□ -0.62
Sox18P43680 Gm28833-201ENSMUST00000189671 559 ntBASIC11.2□□□□□ -0.62
Sox18P43680 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC11.2□□□□□ -0.62
Sox18P43680 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.2□□□□□ -0.62
Sox18P43680 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC11.2□□□□□ -0.62
Sox18P43680 Gm7082-201ENSMUST00000209880 969 ntBASIC11.2□□□□□ -0.62
Sox18P43680 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.2□□□□□ -0.62
Sox18P43680 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.2□□□□□ -0.62
Sox18P43680 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sox18P43680 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sox18P43680 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sox18P43680 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sox18P43680 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sox18P43680 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Sox18P43680 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sox18P43680 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Gm10419-201ENSMUST00000100944 1671 ntTSL 2 BASIC11.2□□□□□ -0.62
Sox18P43680 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.2□□□□□ -0.62
Sox18P43680 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Sox18P43680 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox18P43680 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.19□□□□□ -0.62
Sox18P43680 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Sox18P43680 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sox18P43680 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Sox18P43680 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.19□□□□□ -0.62
Sox18P43680 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
Sox18P43680 Gm11500-201ENSMUST00000118237 601 ntBASIC11.19□□□□□ -0.62
Sox18P43680 Gm14908-201ENSMUST00000120930 1286 ntBASIC11.19□□□□□ -0.62
Sox18P43680 Gm14247-201ENSMUST00000120950 237 ntBASIC11.19□□□□□ -0.62
Sox18P43680 Gm9089-201ENSMUST00000122027 526 ntBASIC11.19□□□□□ -0.62
Sox18P43680 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.19□□□□□ -0.62
Sox18P43680 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Gm12906-201ENSMUST00000154610 441 ntBASIC11.19□□□□□ -0.62
Sox18P43680 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC11.19□□□□□ -0.62
Sox18P43680 Gm4540-201ENSMUST00000170669 429 ntBASIC11.19□□□□□ -0.62
Sox18P43680 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sox18P43680 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Sox18P43680 Gm11942-201ENSMUST00000180255 345 ntBASIC11.19□□□□□ -0.62
Sox18P43680 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.19□□□□□ -0.62
Sox18P43680 Gm37678-201ENSMUST00000192908 1146 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms