Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.59□□□□□ -0.87
Hist1h1dP43277 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gm12742-201ENSMUST00000117326 410 ntBASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gm11573-201ENSMUST00000119956 394 ntBASIC9.59□□□□□ -0.87
Hist1h1dP43277 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gm28686-201ENSMUST00000187404 609 ntBASIC9.59□□□□□ -0.87
Hist1h1dP43277 AY702102-202ENSMUST00000194651 1173 ntBASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gm33366-201ENSMUST00000195583 3827 ntBASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gm9353-201ENSMUST00000200472 604 ntBASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.59□□□□□ -0.87
Hist1h1dP43277 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.59□□□□□ -0.87
Hist1h1dP43277 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hist1h1dP43277 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Hist1h1dP43277 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Hist1h1dP43277 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Hist1h1dP43277 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.58□□□□□ -0.88
Hist1h1dP43277 Gm15276-201ENSMUST00000145953 498 ntBASIC9.58□□□□□ -0.88
Hist1h1dP43277 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms