Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
VhlP40338 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
VhlP40338 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VhlP40338 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
VhlP40338 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
VhlP40338 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
VhlP40338 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VhlP40338 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
VhlP40338 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
VhlP40338 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VhlP40338 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
VhlP40338 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
VhlP40338 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VhlP40338 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.33□□□□□ -0.92
VhlP40338 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
VhlP40338 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VhlP40338 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VhlP40338 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VhlP40338 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VhlP40338 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
VhlP40338 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.32□□□□□ -0.92
VhlP40338 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.32□□□□□ -0.92
VhlP40338 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
VhlP40338 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
VhlP40338 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC9.32□□□□□ -0.92
VhlP40338 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.32□□□□□ -0.92
VhlP40338 Gm4310-201ENSMUST00000177847 889 ntBASIC9.32□□□□□ -0.92
VhlP40338 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC9.32□□□□□ -0.92
VhlP40338 Gm29396-201ENSMUST00000185659 716 ntBASIC9.32□□□□□ -0.92
VhlP40338 Rprl1-202ENSMUST00000198476 238 ntBASIC9.32□□□□□ -0.92
VhlP40338 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.32□□□□□ -0.92
VhlP40338 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.32□□□□□ -0.92
VhlP40338 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
VhlP40338 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
VhlP40338 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
VhlP40338 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
VhlP40338 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
VhlP40338 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
VhlP40338 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VhlP40338 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
VhlP40338 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
VhlP40338 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VhlP40338 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VhlP40338 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VhlP40338 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
VhlP40338 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VhlP40338 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
VhlP40338 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.31□□□□□ -0.92
VhlP40338 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VhlP40338 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VhlP40338 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
VhlP40338 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VhlP40338 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VhlP40338 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
VhlP40338 Gm22133-201ENSMUST00000102082 109 ntBASIC9.31□□□□□ -0.92
VhlP40338 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
VhlP40338 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC9.31□□□□□ -0.92
VhlP40338 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
VhlP40338 Gm5940-201ENSMUST00000117582 1068 ntBASIC9.31□□□□□ -0.92
VhlP40338 Gm14109-201ENSMUST00000118814 309 ntBASIC9.31□□□□□ -0.92
VhlP40338 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.31□□□□□ -0.92
VhlP40338 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.31□□□□□ -0.92
VhlP40338 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VhlP40338 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VhlP40338 Mir6420-201ENSMUST00000185032 102 ntBASIC9.31□□□□□ -0.92
VhlP40338 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.31□□□□□ -0.92
VhlP40338 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC9.31□□□□□ -0.92
VhlP40338 Gm31256-201ENSMUST00000194705 506 ntBASIC9.31□□□□□ -0.92
VhlP40338 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC9.31□□□□□ -0.92
VhlP40338 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VhlP40338 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.31□□□□□ -0.92
VhlP40338 Gm4157-201ENSMUST00000211647 679 ntBASIC9.31□□□□□ -0.92
VhlP40338 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.31□□□□□ -0.92
VhlP40338 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC9.31□□□□□ -0.92
VhlP40338 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.31□□□□□ -0.92
VhlP40338 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.31□□□□□ -0.92
VhlP40338 Gzmn-202ENSMUST00000225535 989 ntBASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms