Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.69□□□□□ -0.54
Cxcl12P40224 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Cxcl12P40224 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Cxcl12P40224 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.69□□□□□ -0.54
Cxcl12P40224 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cxcl12P40224 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.69□□□□□ -0.54
Cxcl12P40224 Gm7805-201ENSMUST00000154348 448 ntBASIC11.69□□□□□ -0.54
Cxcl12P40224 Gm27444-201ENSMUST00000184157 137 ntBASIC11.69□□□□□ -0.54
Cxcl12P40224 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC11.69□□□□□ -0.54
Cxcl12P40224 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Gm38007-201ENSMUST00000192187 313 ntBASIC11.69□□□□□ -0.54
Cxcl12P40224 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.69□□□□□ -0.54
Cxcl12P40224 AC118639.1-202ENSMUST00000226957 653 ntBASIC11.69□□□□□ -0.54
Cxcl12P40224 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cxcl12P40224 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.69□□□□□ -0.54
Cxcl12P40224 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Cxcl12P40224 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.69□□□□□ -0.54
Cxcl12P40224 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl12P40224 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.68□□□□□ -0.54
Cxcl12P40224 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Mir1249-201ENSMUST00000116791 98 ntBASIC11.68□□□□□ -0.54
Cxcl12P40224 Gm24140-201ENSMUST00000122773 326 ntBASIC11.68□□□□□ -0.54
Cxcl12P40224 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Gm23582-201ENSMUST00000158530 139 ntBASIC11.68□□□□□ -0.54
Cxcl12P40224 Gm4775-201ENSMUST00000169588 402 ntBASIC11.68□□□□□ -0.54
Cxcl12P40224 Gm7211-201ENSMUST00000172692 1118 ntBASIC11.68□□□□□ -0.54
Cxcl12P40224 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Gm19927-201ENSMUST00000185792 781 ntBASIC11.68□□□□□ -0.54
Cxcl12P40224 Gm17944-201ENSMUST00000186351 643 ntBASIC11.68□□□□□ -0.54
Cxcl12P40224 Gm5254-201ENSMUST00000188353 977 ntBASIC11.68□□□□□ -0.54
Cxcl12P40224 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cxcl12P40224 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcl12P40224 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Cxcl12P40224 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms