Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Upk2P38575 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Upk2P38575 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Upk2P38575 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Upk2P38575 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.94□□□□□ -0.82
Upk2P38575 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.94□□□□□ -0.82
Upk2P38575 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Upk2P38575 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.94□□□□□ -0.82
Upk2P38575 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.94□□□□□ -0.82
Upk2P38575 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.94□□□□□ -0.82
Upk2P38575 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.94□□□□□ -0.82
Upk2P38575 Gm37981-201ENSMUST00000194280 535 ntBASIC9.94□□□□□ -0.82
Upk2P38575 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.94□□□□□ -0.82
Upk2P38575 Gm43186-201ENSMUST00000198130 824 ntBASIC9.94□□□□□ -0.82
Upk2P38575 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.94□□□□□ -0.82
Upk2P38575 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.94□□□□□ -0.82
Upk2P38575 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Upk2P38575 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Upk2P38575 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Upk2P38575 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.93□□□□□ -0.82
Upk2P38575 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.93□□□□□ -0.82
Upk2P38575 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC9.93□□□□□ -0.82
Upk2P38575 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Upk2P38575 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Upk2P38575 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.93□□□□□ -0.82
Upk2P38575 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Upk2P38575 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Upk2P38575 Gm13045-201ENSMUST00000119019 712 ntBASIC9.93□□□□□ -0.82
Upk2P38575 Gm11836-201ENSMUST00000121022 441 ntBASIC9.93□□□□□ -0.82
Upk2P38575 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC9.93□□□□□ -0.82
Upk2P38575 Gm22144-201ENSMUST00000157402 102 ntBASIC9.93□□□□□ -0.82
Upk2P38575 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.93□□□□□ -0.82
Upk2P38575 Gm4959-201ENSMUST00000197271 1044 ntBASIC9.93□□□□□ -0.82
Upk2P38575 Gm43058-201ENSMUST00000197645 625 ntBASIC9.93□□□□□ -0.82
Upk2P38575 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.93□□□□□ -0.82
Upk2P38575 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.93□□□□□ -0.82
Upk2P38575 AC159747.1-201ENSMUST00000219903 265 ntBASIC9.93□□□□□ -0.82
Upk2P38575 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.93□□□□□ -0.82
Upk2P38575 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.93□□□□□ -0.82
Upk2P38575 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Upk2P38575 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Upk2P38575 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Upk2P38575 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.93□□□□□ -0.82
Upk2P38575 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Upk2P38575 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.93□□□□□ -0.82
Upk2P38575 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Upk2P38575 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Upk2P38575 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Upk2P38575 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms