Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Slc6a1P31648 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Slc6a1P31648 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Slc6a1P31648 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Slc6a1P31648 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Slc6a1P31648 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Slc6a1P31648 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Slc6a1P31648 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Slc6a1P31648 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Slc6a1P31648 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Slc6a1P31648 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Slc6a1P31648 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Slc6a1P31648 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm15236-201ENSMUST00000117309 379 ntBASIC9.77□□□□□ -0.85
Slc6a1P31648 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Rprl1-201ENSMUST00000158050 327 ntBASIC9.77□□□□□ -0.85
Slc6a1P31648 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.77□□□□□ -0.85
Slc6a1P31648 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC9.77□□□□□ -0.85
Slc6a1P31648 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm4857-201ENSMUST00000192718 785 ntBASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm7118-201ENSMUST00000200167 1003 ntBASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm43966-201ENSMUST00000203301 612 ntBASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm6334-201ENSMUST00000207083 228 ntBASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm13097-201ENSMUST00000210722 397 ntBASIC9.77□□□□□ -0.85
Slc6a1P31648 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm30285-201ENSMUST00000214614 422 ntBASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm39404-201ENSMUST00000216350 313 ntBASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.77□□□□□ -0.85
Slc6a1P31648 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.77□□□□□ -0.85
Slc6a1P31648 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Slc6a1P31648 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.76□□□□□ -0.85
Slc6a1P31648 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.76□□□□□ -0.85
Slc6a1P31648 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Gm13316-201ENSMUST00000140537 691 ntBASIC9.76□□□□□ -0.85
Slc6a1P31648 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.76□□□□□ -0.85
Slc6a1P31648 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Slc6a1P31648 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Slc6a1P31648 Gm9192-201ENSMUST00000183221 985 ntBASIC9.76□□□□□ -0.85
Slc6a1P31648 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms