Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.48□□□□□ -0.41
Pde6bP23440 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pde6bP23440 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.48□□□□□ -0.41
Pde6bP23440 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.48□□□□□ -0.41
Pde6bP23440 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.48□□□□□ -0.41
Pde6bP23440 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.48□□□□□ -0.41
Pde6bP23440 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.48□□□□□ -0.41
Pde6bP23440 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.48□□□□□ -0.41
Pde6bP23440 Mir6407-201ENSMUST00000184510 101 ntBASIC12.48□□□□□ -0.41
Pde6bP23440 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.48□□□□□ -0.41
Pde6bP23440 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.48□□□□□ -0.41
Pde6bP23440 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.48□□□□□ -0.41
Pde6bP23440 Gm3619-201ENSMUST00000219947 775 ntBASIC12.48□□□□□ -0.41
Pde6bP23440 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pde6bP23440 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.48□□□□□ -0.41
Pde6bP23440 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.48□□□□□ -0.41
Pde6bP23440 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Pde6bP23440 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Pde6bP23440 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.47□□□□□ -0.41
Pde6bP23440 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pde6bP23440 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pde6bP23440 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pde6bP23440 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pde6bP23440 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.47□□□□□ -0.41
Pde6bP23440 Gm23218-201ENSMUST00000158124 276 ntBASIC12.47□□□□□ -0.41
Pde6bP23440 Gm6407-201ENSMUST00000176468 549 ntBASIC12.47□□□□□ -0.41
Pde6bP23440 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.47□□□□□ -0.41
Pde6bP23440 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.47□□□□□ -0.41
Pde6bP23440 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.47□□□□□ -0.41
Pde6bP23440 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pde6bP23440 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.47□□□□□ -0.41
Pde6bP23440 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6bP23440 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Pde6bP23440 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Pde6bP23440 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pde6bP23440 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.46□□□□□ -0.41
Pde6bP23440 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.46□□□□□ -0.41
Pde6bP23440 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Pde6bP23440 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.46□□□□□ -0.41
Pde6bP23440 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.46□□□□□ -0.41
Pde6bP23440 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.46□□□□□ -0.41
Pde6bP23440 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.46□□□□□ -0.41
Pde6bP23440 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pde6bP23440 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Pde6bP23440 Gm25951-201ENSMUST00000175330 64 ntBASIC12.46□□□□□ -0.41
Pde6bP23440 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Pde6bP23440 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.46□□□□□ -0.41
Pde6bP23440 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.46□□□□□ -0.41
Pde6bP23440 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.46□□□□□ -0.41
Pde6bP23440 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.46□□□□□ -0.41
Pde6bP23440 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.46□□□□□ -0.41
Pde6bP23440 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.46□□□□□ -0.41
Pde6bP23440 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Pde6bP23440 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pde6bP23440 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pde6bP23440 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms