Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.45□□□□□ -0.58
VimP20152 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
VimP20152 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
VimP20152 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.45□□□□□ -0.58
VimP20152 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.45□□□□□ -0.58
VimP20152 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Gm11591-201ENSMUST00000120063 702 ntBASIC11.45□□□□□ -0.58
VimP20152 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.45□□□□□ -0.58
VimP20152 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.45□□□□□ -0.58
VimP20152 Gm6244-201ENSMUST00000178732 841 ntBASIC11.45□□□□□ -0.58
VimP20152 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.45□□□□□ -0.58
VimP20152 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.45□□□□□ -0.58
VimP20152 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.45□□□□□ -0.58
VimP20152 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.45□□□□□ -0.58
VimP20152 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
VimP20152 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
VimP20152 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.45□□□□□ -0.58
VimP20152 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VimP20152 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC11.45□□□□□ -0.58
VimP20152 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
VimP20152 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.44□□□□□ -0.58
VimP20152 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.44□□□□□ -0.58
VimP20152 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.44□□□□□ -0.58
VimP20152 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
VimP20152 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.44□□□□□ -0.58
VimP20152 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.44□□□□□ -0.58
VimP20152 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
VimP20152 Gm11814-201ENSMUST00000119515 929 ntBASIC11.44□□□□□ -0.58
VimP20152 Gm13875-201ENSMUST00000120162 282 ntBASIC11.44□□□□□ -0.58
VimP20152 Mir1894-201ENSMUST00000122802 81 ntBASIC11.44□□□□□ -0.58
VimP20152 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
VimP20152 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.44□□□□□ -0.58
VimP20152 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.44□□□□□ -0.58
VimP20152 Mir7023-201ENSMUST00000185093 64 ntBASIC11.44□□□□□ -0.58
VimP20152 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.44□□□□□ -0.58
VimP20152 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.44□□□□□ -0.58
VimP20152 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
VimP20152 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.44□□□□□ -0.58
VimP20152 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.44□□□□□ -0.58
VimP20152 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
VimP20152 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.44□□□□□ -0.58
VimP20152 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
VimP20152 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
VimP20152 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC11.44□□□□□ -0.58
VimP20152 AC158779.1-201ENSMUST00000228912 3861 ntBASIC11.44□□□□□ -0.58
VimP20152 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VimP20152 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
VimP20152 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VimP20152 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VimP20152 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VimP20152 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VimP20152 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.43□□□□□ -0.58
VimP20152 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VimP20152 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VimP20152 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VimP20152 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VimP20152 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.43□□□□□ -0.58
VimP20152 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC11.43□□□□□ -0.58
VimP20152 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VimP20152 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC11.43□□□□□ -0.58
VimP20152 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VimP20152 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.43□□□□□ -0.58
VimP20152 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms