Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Gm9061-201ENSMUST00000182707 1006 ntBASIC9.22□□□□□ -0.93
Cdx1P18111 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.22□□□□□ -0.93
Cdx1P18111 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.22□□□□□ -0.93
Cdx1P18111 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC9.22□□□□□ -0.93
Cdx1P18111 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.22□□□□□ -0.93
Cdx1P18111 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Gm4454-201ENSMUST00000190585 2578 ntBASIC9.22□□□□□ -0.93
Cdx1P18111 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.22□□□□□ -0.93
Cdx1P18111 AC167669.2-201ENSMUST00000224417 1620 ntBASIC9.22□□□□□ -0.93
Cdx1P18111 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Gm37593-201ENSMUST00000191669 3254 ntBASIC9.22□□□□□ -0.93
Cdx1P18111 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.22□□□□□ -0.93
Cdx1P18111 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cdx1P18111 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.22□□□□□ -0.93
Cdx1P18111 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cdx1P18111 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cdx1P18111 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx1P18111 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Cdx1P18111 Gm16387-201ENSMUST00000180990 2632 ntBASIC9.21□□□□□ -0.93
Cdx1P18111 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx1P18111 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx1P18111 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Cdx1P18111 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx1P18111 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Cdx1P18111 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
Cdx1P18111 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.21□□□□□ -0.93
Cdx1P18111 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx1P18111 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.21□□□□□ -0.93
Cdx1P18111 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx1P18111 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx1P18111 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx1P18111 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Cdx1P18111 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
Cdx1P18111 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC9.21□□□□□ -0.93
Cdx1P18111 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx1P18111 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx1P18111 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cdx1P18111 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Cdx1P18111 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Cdx1P18111 Gm23270-201ENSMUST00000104055 131 ntBASIC9.21□□□□□ -0.94
Cdx1P18111 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Gm11531-201ENSMUST00000117614 555 ntBASIC9.21□□□□□ -0.94
Cdx1P18111 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.21□□□□□ -0.94
Cdx1P18111 Gm14704-201ENSMUST00000120300 874 ntBASIC9.21□□□□□ -0.94
Cdx1P18111 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.21□□□□□ -0.94
Cdx1P18111 Gm15547-201ENSMUST00000122152 333 ntBASIC9.21□□□□□ -0.94
Cdx1P18111 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC9.21□□□□□ -0.94
Cdx1P18111 Gm24990-201ENSMUST00000157406 323 ntBASIC9.21□□□□□ -0.94
Cdx1P18111 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.21□□□□□ -0.94
Cdx1P18111 Gm23363-201ENSMUST00000175024 79 ntBASIC9.21□□□□□ -0.94
Cdx1P18111 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Gm18916-201ENSMUST00000198264 1246 ntBASIC9.21□□□□□ -0.94
Cdx1P18111 Gm45186-201ENSMUST00000206874 478 ntBASIC9.21□□□□□ -0.94
Cdx1P18111 Gm5950-201ENSMUST00000213337 772 ntBASIC9.21□□□□□ -0.94
Cdx1P18111 Gm19208-201ENSMUST00000213861 912 ntBASIC9.21□□□□□ -0.94
Cdx1P18111 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.21□□□□□ -0.94
Cdx1P18111 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Cdx1P18111 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC9.21□□□□□ -0.94
Cdx1P18111 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.21□□□□□ -0.94
Cdx1P18111 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC9.21□□□□□ -0.94
Cdx1P18111 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Gm8862-201ENSMUST00000198379 1346 ntBASIC9.21□□□□□ -0.94
Cdx1P18111 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Cdx1P18111 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Cdx1P18111 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Cdx1P18111 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.21□□□□□ -0.94
Cdx1P18111 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.21□□□□□ -0.94
Cdx1P18111 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cdx1P18111 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms