Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rb1P13405 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rb1P13405 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.75□□□□□ -0.53
Rb1P13405 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rb1P13405 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.74□□□□□ -0.53
Rb1P13405 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.74□□□□□ -0.53
Rb1P13405 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.74□□□□□ -0.53
Rb1P13405 Gm13916-201ENSMUST00000117368 628 ntBASIC11.74□□□□□ -0.53
Rb1P13405 Gm1848-201ENSMUST00000120711 789 ntBASIC11.74□□□□□ -0.53
Rb1P13405 Gm11675-201ENSMUST00000121873 832 ntBASIC11.74□□□□□ -0.53
Rb1P13405 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.74□□□□□ -0.53
Rb1P13405 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.74□□□□□ -0.53
Rb1P13405 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.74□□□□□ -0.53
Rb1P13405 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.74□□□□□ -0.53
Rb1P13405 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Mir6998-201ENSMUST00000183343 64 ntBASIC11.74□□□□□ -0.53
Rb1P13405 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.74□□□□□ -0.53
Rb1P13405 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.74□□□□□ -0.53
Rb1P13405 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.74□□□□□ -0.53
Rb1P13405 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.74□□□□□ -0.53
Rb1P13405 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rb1P13405 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.74□□□□□ -0.53
Rb1P13405 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rb1P13405 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.74□□□□□ -0.53
Rb1P13405 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rb1P13405 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rb1P13405 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rb1P13405 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Rb1P13405 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Gm11949-201ENSMUST00000117640 372 ntBASIC11.73□□□□□ -0.53
Rb1P13405 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.73□□□□□ -0.53
Rb1P13405 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rb1P13405 Gm14247-201ENSMUST00000120950 237 ntBASIC11.73□□□□□ -0.53
Rb1P13405 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.73□□□□□ -0.53
Rb1P13405 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.73□□□□□ -0.53
Rb1P13405 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.73□□□□□ -0.53
Rb1P13405 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Gm6485-201ENSMUST00000160676 439 ntBASIC11.73□□□□□ -0.53
Rb1P13405 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.73□□□□□ -0.53
Rb1P13405 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.73□□□□□ -0.53
Rb1P13405 Gm43186-201ENSMUST00000198130 824 ntBASIC11.73□□□□□ -0.53
Rb1P13405 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.73□□□□□ -0.53
Rb1P13405 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.73□□□□□ -0.53
Rb1P13405 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.73□□□□□ -0.53
Rb1P13405 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.73□□□□□ -0.53
Rb1P13405 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rb1P13405 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rb1P13405 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.73□□□□□ -0.53
Rb1P13405 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rb1P13405 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rb1P13405 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms