Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.96□□□□□ -0.65
Fv4P11370 Gm15515-201ENSMUST00000117827 822 ntBASIC10.96□□□□□ -0.65
Fv4P11370 Gm8731-201ENSMUST00000118088 412 ntBASIC10.96□□□□□ -0.65
Fv4P11370 Gm12266-201ENSMUST00000120311 962 ntBASIC10.96□□□□□ -0.65
Fv4P11370 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.96□□□□□ -0.65
Fv4P11370 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Fv4P11370 Gm9540-201ENSMUST00000188230 478 ntBASIC10.96□□□□□ -0.65
Fv4P11370 Gm5733-201ENSMUST00000190232 939 ntBASIC10.96□□□□□ -0.65
Fv4P11370 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.96□□□□□ -0.65
Fv4P11370 Gm8342-201ENSMUST00000209839 757 ntBASIC10.96□□□□□ -0.65
Fv4P11370 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.96□□□□□ -0.65
Fv4P11370 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.96□□□□□ -0.65
Fv4P11370 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Fv4P11370 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.96□□□□□ -0.65
Fv4P11370 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Fv4P11370 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Fv4P11370 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.96□□□□□ -0.66
Fv4P11370 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.96□□□□□ -0.66
Fv4P11370 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Fv4P11370 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.96□□□□□ -0.66
Fv4P11370 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Fv4P11370 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Fv4P11370 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Fv4P11370 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.96□□□□□ -0.66
Fv4P11370 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Fv4P11370 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Fv4P11370 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.96□□□□□ -0.66
Fv4P11370 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Fv4P11370 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Fv4P11370 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Fv4P11370 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.95□□□□□ -0.66
Fv4P11370 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.95□□□□□ -0.66
Fv4P11370 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.95□□□□□ -0.66
Fv4P11370 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.95□□□□□ -0.66
Fv4P11370 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.95□□□□□ -0.66
Fv4P11370 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Fv4P11370 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Fv4P11370 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Gm17040-202ENSMUST00000170597 889 ntBASIC10.95□□□□□ -0.66
Fv4P11370 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.95□□□□□ -0.66
Fv4P11370 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.95□□□□□ -0.66
Fv4P11370 Gm12407-201ENSMUST00000180219 324 ntBASIC10.95□□□□□ -0.66
Fv4P11370 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.95□□□□□ -0.66
Fv4P11370 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.95□□□□□ -0.66
Fv4P11370 Gm5996-201ENSMUST00000211110 718 ntBASIC10.95□□□□□ -0.66
Fv4P11370 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Gm18212-201ENSMUST00000211678 889 ntBASIC10.95□□□□□ -0.66
Fv4P11370 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.95□□□□□ -0.66
Fv4P11370 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Fv4P11370 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Fv4P11370 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.95□□□□□ -0.66
Fv4P11370 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.95□□□□□ -0.66
Fv4P11370 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.95□□□□□ -0.66
Fv4P11370 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.95□□□□□ -0.66
Fv4P11370 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Fv4P11370 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Fv4P11370 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Fv4P11370 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.95□□□□□ -0.66
Fv4P11370 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Fv4P11370 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.94□□□□□ -0.66
Fv4P11370 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Fv4P11370 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Fv4P11370 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms