Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.02□□□□□ -0.8
Ccl3P10855 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ccl3P10855 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Ccl3P10855 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Ccl3P10855 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Ccl3P10855 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.02□□□□□ -0.8
Ccl3P10855 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Ccl3P10855 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ccl3P10855 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ccl3P10855 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ccl3P10855 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.02□□□□□ -0.8
Ccl3P10855 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Ccl3P10855 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.02□□□□□ -0.81
Ccl3P10855 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Ccl3P10855 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.02□□□□□ -0.81
Ccl3P10855 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.02□□□□□ -0.81
Ccl3P10855 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Gm25226-201ENSMUST00000158198 123 ntBASIC10.02□□□□□ -0.81
Ccl3P10855 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.02□□□□□ -0.81
Ccl3P10855 Gm26119-201ENSMUST00000175601 104 ntBASIC10.02□□□□□ -0.81
Ccl3P10855 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
Ccl3P10855 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.02□□□□□ -0.81
Ccl3P10855 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.02□□□□□ -0.81
Ccl3P10855 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Gm43610-201ENSMUST00000199117 365 ntBASIC10.02□□□□□ -0.81
Ccl3P10855 Olfr692-202ENSMUST00000217827 1126 ntBASIC10.02□□□□□ -0.81
Ccl3P10855 Gm9791-201ENSMUST00000060997 447 ntBASIC10.02□□□□□ -0.81
Ccl3P10855 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Ccl3P10855 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.02□□□□□ -0.81
Ccl3P10855 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.02□□□□□ -0.81
Ccl3P10855 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Ccl3P10855 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl3P10855 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.02□□□□□ -0.81
Ccl3P10855 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Ccl3P10855 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.01□□□□□ -0.81
Ccl3P10855 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.01□□□□□ -0.81
Ccl3P10855 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ccl3P10855 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ccl3P10855 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ccl3P10855 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Gm14005-210ENSMUST00000225087 1413 ntBASIC10.01□□□□□ -0.81
Ccl3P10855 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.01□□□□□ -0.81
Ccl3P10855 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.01□□□□□ -0.81
Ccl3P10855 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.01□□□□□ -0.81
Ccl3P10855 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC10.01□□□□□ -0.81
Ccl3P10855 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Ccl3P10855 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Snord55-201ENSMUST00000174939 79 ntBASIC10.01□□□□□ -0.81
Ccl3P10855 Gm37782-201ENSMUST00000194879 678 ntBASIC10.01□□□□□ -0.81
Ccl3P10855 Gm43506-201ENSMUST00000200675 753 ntBASIC10.01□□□□□ -0.81
Ccl3P10855 Gm5340-201ENSMUST00000203733 880 ntBASIC10.01□□□□□ -0.81
Ccl3P10855 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.01□□□□□ -0.81
Ccl3P10855 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.01□□□□□ -0.81
Ccl3P10855 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Gm8894-201ENSMUST00000074642 666 ntBASIC10.01□□□□□ -0.81
Ccl3P10855 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Ccl3P10855 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.01□□□□□ -0.81
Ccl3P10855 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ccl3P10855 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ccl3P10855 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms