Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.52□□□□□ -0.41
Trdmt1O55055 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.51□□□□□ -0.41
Trdmt1O55055 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Gm22937-201ENSMUST00000103954 131 ntBASIC12.51□□□□□ -0.41
Trdmt1O55055 Gm22594-201ENSMUST00000104251 130 ntBASIC12.51□□□□□ -0.41
Trdmt1O55055 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Snord55-201ENSMUST00000174939 79 ntBASIC12.51□□□□□ -0.41
Trdmt1O55055 Gm43969-201ENSMUST00000204833 535 ntBASIC12.51□□□□□ -0.41
Trdmt1O55055 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.51□□□□□ -0.41
Trdmt1O55055 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.51□□□□□ -0.41
Trdmt1O55055 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdmt1O55055 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.51□□□□□ -0.41
Trdmt1O55055 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.51□□□□□ -0.41
Trdmt1O55055 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdmt1O55055 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trdmt1O55055 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdmt1O55055 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.5□□□□□ -0.41
Trdmt1O55055 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdmt1O55055 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trdmt1O55055 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdmt1O55055 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdmt1O55055 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trdmt1O55055 Gm16165-201ENSMUST00000160140 795 ntBASIC12.5□□□□□ -0.41
Trdmt1O55055 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdmt1O55055 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.5□□□□□ -0.41
Trdmt1O55055 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.5□□□□□ -0.41
Trdmt1O55055 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.5□□□□□ -0.41
Trdmt1O55055 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.5□□□□□ -0.41
Trdmt1O55055 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdmt1O55055 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdmt1O55055 Gm7589-201ENSMUST00000085631 534 ntBASIC12.5□□□□□ -0.41
Trdmt1O55055 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.5□□□□□ -0.41
Trdmt1O55055 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Trdmt1O55055 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trdmt1O55055 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trdmt1O55055 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdmt1O55055 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trdmt1O55055 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdmt1O55055 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trdmt1O55055 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trdmt1O55055 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdmt1O55055 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trdmt1O55055 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trdmt1O55055 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trdmt1O55055 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdmt1O55055 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.49□□□□□ -0.41
Trdmt1O55055 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trdmt1O55055 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdmt1O55055 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trdmt1O55055 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.49□□□□□ -0.41
Trdmt1O55055 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
Trdmt1O55055 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trdmt1O55055 Gm12986-201ENSMUST00000119037 967 ntBASIC12.49□□□□□ -0.41
Trdmt1O55055 Gm11993-201ENSMUST00000121861 820 ntBASIC12.49□□□□□ -0.41
Trdmt1O55055 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.49□□□□□ -0.41
Trdmt1O55055 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trdmt1O55055 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Trdmt1O55055 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.49□□□□□ -0.41
Trdmt1O55055 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdmt1O55055 Gm20781-201ENSMUST00000193154 693 ntBASIC12.49□□□□□ -0.41
Trdmt1O55055 Gm21736-201ENSMUST00000195399 693 ntBASIC12.49□□□□□ -0.41
Trdmt1O55055 Gm42779-201ENSMUST00000198807 406 ntBASIC12.49□□□□□ -0.41
Trdmt1O55055 Gm43506-201ENSMUST00000200675 753 ntBASIC12.49□□□□□ -0.41
Trdmt1O55055 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trdmt1O55055 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms