Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
BckdkO55028 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.56□□□□□ -0.72
BckdkO55028 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
BckdkO55028 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
BckdkO55028 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.56□□□□□ -0.72
BckdkO55028 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
BckdkO55028 Gm15595-201ENSMUST00000120840 961 ntBASIC10.56□□□□□ -0.72
BckdkO55028 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.56□□□□□ -0.72
BckdkO55028 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.56□□□□□ -0.72
BckdkO55028 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.56□□□□□ -0.72
BckdkO55028 Gm4726-201ENSMUST00000135604 736 ntBASIC10.56□□□□□ -0.72
BckdkO55028 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
BckdkO55028 Gm6019-201ENSMUST00000148369 736 ntBASIC10.56□□□□□ -0.72
BckdkO55028 Gm26047-201ENSMUST00000157308 113 ntBASIC10.56□□□□□ -0.72
BckdkO55028 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.56□□□□□ -0.72
BckdkO55028 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.56□□□□□ -0.72
BckdkO55028 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Gm4310-201ENSMUST00000177847 889 ntBASIC10.56□□□□□ -0.72
BckdkO55028 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.56□□□□□ -0.72
BckdkO55028 Gm38117-201ENSMUST00000194653 939 ntBASIC10.56□□□□□ -0.72
BckdkO55028 Gm26047-202ENSMUST00000198840 115 ntBASIC10.56□□□□□ -0.72
BckdkO55028 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.56□□□□□ -0.72
BckdkO55028 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
BckdkO55028 Gm44551-201ENSMUST00000208804 171 ntBASIC10.56□□□□□ -0.72
BckdkO55028 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.56□□□□□ -0.72
BckdkO55028 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.56□□□□□ -0.72
BckdkO55028 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.56□□□□□ -0.72
BckdkO55028 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.56□□□□□ -0.72
BckdkO55028 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.56□□□□□ -0.72
BckdkO55028 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.56□□□□□ -0.72
BckdkO55028 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.56□□□□□ -0.72
BckdkO55028 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
BckdkO55028 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
BckdkO55028 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
BckdkO55028 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
BckdkO55028 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.56□□□□□ -0.72
BckdkO55028 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.56□□□□□ -0.72
BckdkO55028 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
BckdkO55028 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
BckdkO55028 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
BckdkO55028 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.55□□□□□ -0.72
BckdkO55028 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
BckdkO55028 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
BckdkO55028 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
BckdkO55028 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
BckdkO55028 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
BckdkO55028 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.55□□□□□ -0.72
BckdkO55028 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.55□□□□□ -0.72
BckdkO55028 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
BckdkO55028 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.55□□□□□ -0.72
BckdkO55028 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
BckdkO55028 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
BckdkO55028 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.55□□□□□ -0.72
BckdkO55028 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
BckdkO55028 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
BckdkO55028 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
BckdkO55028 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
BckdkO55028 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
BckdkO55028 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
BckdkO55028 Gm15352-201ENSMUST00000118696 270 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms