Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
Rnf13O54965 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.28□□□□□ -0.76
Rnf13O54965 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Rnf13O54965 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Rnf13O54965 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Rnf13O54965 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Rnf13O54965 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Rnf13O54965 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf13O54965 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.27□□□□□ -0.76
Rnf13O54965 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf13O54965 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf13O54965 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf13O54965 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf13O54965 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf13O54965 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.27□□□□□ -0.76
Rnf13O54965 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.27□□□□□ -0.76
Rnf13O54965 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.27□□□□□ -0.77
Rnf13O54965 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.27□□□□□ -0.77
Rnf13O54965 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Rnf13O54965 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Gm14127-201ENSMUST00000117906 678 ntBASIC10.27□□□□□ -0.77
Rnf13O54965 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.27□□□□□ -0.77
Rnf13O54965 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.27□□□□□ -0.77
Rnf13O54965 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.27□□□□□ -0.77
Rnf13O54965 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.27□□□□□ -0.77
Rnf13O54965 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.27□□□□□ -0.77
Rnf13O54965 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Gm8343-201ENSMUST00000182705 994 ntBASIC10.27□□□□□ -0.77
Rnf13O54965 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.27□□□□□ -0.77
Rnf13O54965 Gm38266-201ENSMUST00000194931 421 ntBASIC10.27□□□□□ -0.77
Rnf13O54965 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.27□□□□□ -0.77
Rnf13O54965 Gm4157-201ENSMUST00000211647 679 ntBASIC10.27□□□□□ -0.77
Rnf13O54965 Gm45865-201ENSMUST00000211815 945 ntBASIC10.27□□□□□ -0.77
Rnf13O54965 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.27□□□□□ -0.77
Rnf13O54965 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.27□□□□□ -0.77
Rnf13O54965 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Rnf13O54965 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.27□□□□□ -0.77
Rnf13O54965 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Rnf13O54965 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Rnf13O54965 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.27□□□□□ -0.77
Rnf13O54965 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.27□□□□□ -0.77
Rnf13O54965 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.27□□□□□ -0.77
Rnf13O54965 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.27□□□□□ -0.77
Rnf13O54965 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.27□□□□□ -0.77
Rnf13O54965 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Rnf13O54965 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf13O54965 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.26□□□□□ -0.77
Rnf13O54965 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Rnf13O54965 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Rnf13O54965 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.26□□□□□ -0.77
Rnf13O54965 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Rnf13O54965 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.26□□□□□ -0.77
Rnf13O54965 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms