Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.5□□□□□ -0.41
Trim30cD3YVI9 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Gm27552-201ENSMUST00000183351 62 ntBASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Gm27844-201ENSMUST00000183613 62 ntBASIC12.5□□□□□ -0.41
Trim30cD3YVI9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Gm18827-201ENSMUST00000188341 790 ntBASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Gm44863-201ENSMUST00000207613 1422 ntBASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim30cD3YVI9 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.49□□□□□ -0.41
Trim30cD3YVI9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.49□□□□□ -0.41
Trim30cD3YVI9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Gm5419-201ENSMUST00000119301 527 ntBASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Gm23757-201ENSMUST00000158353 100 ntBASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Gm25732-201ENSMUST00000175168 60 ntBASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Mir7677-201ENSMUST00000184226 67 ntBASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Gm8956-201ENSMUST00000203939 825 ntBASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.49□□□□□ -0.41
Trim30cD3YVI9 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim30cD3YVI9 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.48□□□□□ -0.41
Trim30cD3YVI9 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim30cD3YVI9 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms