Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1bQ9Z2C6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1bQ9Z2C6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1bQ9Z2C6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.86■□□□□ 0.61
Upk1bQ9Z2C6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Upk1bQ9Z2C6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1bQ9Z2C6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.86■□□□□ 0.61
Upk1bQ9Z2C6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1bQ9Z2C6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1bQ9Z2C6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1bQ9Z2C6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1bQ9Z2C6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.85■□□□□ 0.61
Upk1bQ9Z2C6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.85■□□□□ 0.61
Upk1bQ9Z2C6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upk1bQ9Z2C6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upk1bQ9Z2C6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upk1bQ9Z2C6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upk1bQ9Z2C6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Upk1bQ9Z2C6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1bQ9Z2C6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1bQ9Z2C6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1bQ9Z2C6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1bQ9Z2C6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1bQ9Z2C6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1bQ9Z2C6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1bQ9Z2C6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1bQ9Z2C6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1bQ9Z2C6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1bQ9Z2C6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1bQ9Z2C6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Upk1bQ9Z2C6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Upk1bQ9Z2C6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Upk1bQ9Z2C6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Upk1bQ9Z2C6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.83■□□□□ 0.6
Upk1bQ9Z2C6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upk1bQ9Z2C6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upk1bQ9Z2C6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.83■□□□□ 0.6
Upk1bQ9Z2C6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upk1bQ9Z2C6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Upk1bQ9Z2C6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upk1bQ9Z2C6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upk1bQ9Z2C6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Upk1bQ9Z2C6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.83■□□□□ 0.6
Upk1bQ9Z2C6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1bQ9Z2C6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1bQ9Z2C6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1bQ9Z2C6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1bQ9Z2C6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1bQ9Z2C6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1bQ9Z2C6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1bQ9Z2C6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.82■□□□□ 0.6
Upk1bQ9Z2C6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1bQ9Z2C6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1bQ9Z2C6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Upk1bQ9Z2C6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Upk1bQ9Z2C6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk1bQ9Z2C6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Upk1bQ9Z2C6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk1bQ9Z2C6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk1bQ9Z2C6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk1bQ9Z2C6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk1bQ9Z2C6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk1bQ9Z2C6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Upk1bQ9Z2C6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk1bQ9Z2C6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk1bQ9Z2C6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Upk1bQ9Z2C6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Upk1bQ9Z2C6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Upk1bQ9Z2C6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk1bQ9Z2C6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Upk1bQ9Z2C6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Upk1bQ9Z2C6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk1bQ9Z2C6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk1bQ9Z2C6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk1bQ9Z2C6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upk1bQ9Z2C6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.79■□□□□ 0.6
Upk1bQ9Z2C6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.79■□□□□ 0.6
Upk1bQ9Z2C6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.79■□□□□ 0.6
Upk1bQ9Z2C6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Upk1bQ9Z2C6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upk1bQ9Z2C6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.78■□□□□ 0.6
Upk1bQ9Z2C6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.78■□□□□ 0.6
Upk1bQ9Z2C6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Upk1bQ9Z2C6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Upk1bQ9Z2C6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upk1bQ9Z2C6 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.78■□□□□ 0.6
Upk1bQ9Z2C6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.78■□□□□ 0.6
Upk1bQ9Z2C6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Upk1bQ9Z2C6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Upk1bQ9Z2C6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1bQ9Z2C6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1bQ9Z2C6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1bQ9Z2C6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1bQ9Z2C6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1bQ9Z2C6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1bQ9Z2C6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1bQ9Z2C6 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.77■□□□□ 0.6
Upk1bQ9Z2C6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1bQ9Z2C6 Gm27502-201ENSMUST00000183495 199 ntBASIC18.77■□□□□ 0.6
Upk1bQ9Z2C6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms