Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn9Q9Z0S7 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.58■□□□□ 0.72
Cldn9Q9Z0S7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn9Q9Z0S7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn9Q9Z0S7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Cldn9Q9Z0S7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn9Q9Z0S7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn9Q9Z0S7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn9Q9Z0S7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn9Q9Z0S7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn9Q9Z0S7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.57■□□□□ 0.72
Cldn9Q9Z0S7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cldn9Q9Z0S7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cldn9Q9Z0S7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn9Q9Z0S7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn9Q9Z0S7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn9Q9Z0S7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn9Q9Z0S7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.56■□□□□ 0.72
Cldn9Q9Z0S7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn9Q9Z0S7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn9Q9Z0S7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn9Q9Z0S7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn9Q9Z0S7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.55■□□□□ 0.72
Cldn9Q9Z0S7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn9Q9Z0S7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn9Q9Z0S7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.55■□□□□ 0.72
Cldn9Q9Z0S7 Gm15546-201ENSMUST00000122095 826 ntBASIC19.55■□□□□ 0.72
Cldn9Q9Z0S7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.55■□□□□ 0.72
Cldn9Q9Z0S7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn9Q9Z0S7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn9Q9Z0S7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn9Q9Z0S7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn9Q9Z0S7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn9Q9Z0S7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cldn9Q9Z0S7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.54■□□□□ 0.72
Cldn9Q9Z0S7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn9Q9Z0S7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Cldn9Q9Z0S7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn9Q9Z0S7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.54■□□□□ 0.72
Cldn9Q9Z0S7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.54■□□□□ 0.72
Cldn9Q9Z0S7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn9Q9Z0S7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn9Q9Z0S7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.54■□□□□ 0.72
Cldn9Q9Z0S7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn9Q9Z0S7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn9Q9Z0S7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.53■□□□□ 0.72
Cldn9Q9Z0S7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn9Q9Z0S7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn9Q9Z0S7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.53■□□□□ 0.72
Cldn9Q9Z0S7 Gm7143-201ENSMUST00000222811 859 ntBASIC19.53■□□□□ 0.72
Cldn9Q9Z0S7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn9Q9Z0S7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn9Q9Z0S7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cldn9Q9Z0S7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn9Q9Z0S7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn9Q9Z0S7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn9Q9Z0S7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn9Q9Z0S7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn9Q9Z0S7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.52■□□□□ 0.72
Cldn9Q9Z0S7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn9Q9Z0S7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Cldn9Q9Z0S7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn9Q9Z0S7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn9Q9Z0S7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
Cldn9Q9Z0S7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn9Q9Z0S7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn9Q9Z0S7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.51■□□□□ 0.71
Cldn9Q9Z0S7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn9Q9Z0S7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn9Q9Z0S7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cldn9Q9Z0S7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn9Q9Z0S7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn9Q9Z0S7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn9Q9Z0S7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn9Q9Z0S7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn9Q9Z0S7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn9Q9Z0S7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn9Q9Z0S7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn9Q9Z0S7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cldn9Q9Z0S7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cldn9Q9Z0S7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn9Q9Z0S7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.5■□□□□ 0.71
Cldn9Q9Z0S7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn9Q9Z0S7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.5■□□□□ 0.71
Cldn9Q9Z0S7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn9Q9Z0S7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn9Q9Z0S7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn9Q9Z0S7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn9Q9Z0S7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn9Q9Z0S7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn9Q9Z0S7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn9Q9Z0S7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn9Q9Z0S7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cldn9Q9Z0S7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn9Q9Z0S7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn9Q9Z0S7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn9Q9Z0S7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn9Q9Z0S7 Gm7417-201ENSMUST00000192950 473 ntBASIC19.48■□□□□ 0.71
Cldn9Q9Z0S7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cldn9Q9Z0S7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms