Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcb1Q9Z0H3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcb1Q9Z0H3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcb1Q9Z0H3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcb1Q9Z0H3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.17■□□□□ 0.98
Smarcb1Q9Z0H3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcb1Q9Z0H3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcb1Q9Z0H3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcb1Q9Z0H3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.16■□□□□ 0.98
Smarcb1Q9Z0H3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Smarcb1Q9Z0H3 Gm43173-201ENSMUST00000202246 593 ntBASIC21.16■□□□□ 0.98
Smarcb1Q9Z0H3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcb1Q9Z0H3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcb1Q9Z0H3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Smarcb1Q9Z0H3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Smarcb1Q9Z0H3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcb1Q9Z0H3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Smarcb1Q9Z0H3 Gm43017-201ENSMUST00000198296 752 ntBASIC21.15■□□□□ 0.98
Smarcb1Q9Z0H3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcb1Q9Z0H3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcb1Q9Z0H3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcb1Q9Z0H3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smarcb1Q9Z0H3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smarcb1Q9Z0H3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcb1Q9Z0H3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcb1Q9Z0H3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.14■□□□□ 0.97
Smarcb1Q9Z0H3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcb1Q9Z0H3 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 Gm12251-201ENSMUST00000117893 792 ntBASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcb1Q9Z0H3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.12■□□□□ 0.97
Smarcb1Q9Z0H3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcb1Q9Z0H3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcb1Q9Z0H3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcb1Q9Z0H3 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Mir6236-201ENSMUST00000184437 123 ntBASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcb1Q9Z0H3 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.1■□□□□ 0.97
Smarcb1Q9Z0H3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Smarcb1Q9Z0H3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarcb1Q9Z0H3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarcb1Q9Z0H3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarcb1Q9Z0H3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarcb1Q9Z0H3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcb1Q9Z0H3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcb1Q9Z0H3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Smarcb1Q9Z0H3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcb1Q9Z0H3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Smarcb1Q9Z0H3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcb1Q9Z0H3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Smarcb1Q9Z0H3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcb1Q9Z0H3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Smarcb1Q9Z0H3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcb1Q9Z0H3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcb1Q9Z0H3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.08■□□□□ 0.97
Smarcb1Q9Z0H3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarcb1Q9Z0H3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smarcb1Q9Z0H3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarcb1Q9Z0H3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarcb1Q9Z0H3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.08■□□□□ 0.97
Smarcb1Q9Z0H3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smarcb1Q9Z0H3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smarcb1Q9Z0H3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarcb1Q9Z0H3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smarcb1Q9Z0H3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.07■□□□□ 0.96
Smarcb1Q9Z0H3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcb1Q9Z0H3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcb1Q9Z0H3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcb1Q9Z0H3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcb1Q9Z0H3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
Smarcb1Q9Z0H3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.07■□□□□ 0.96
Smarcb1Q9Z0H3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
Smarcb1Q9Z0H3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcb1Q9Z0H3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 1288.4 ms