Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ap4s1Q9WVL1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ap4s1Q9WVL1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ap4s1Q9WVL1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ap4s1Q9WVL1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Ap4s1Q9WVL1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ap4s1Q9WVL1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ap4s1Q9WVL1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ap4s1Q9WVL1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ap4s1Q9WVL1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.47■□□□□ 0.71
Ap4s1Q9WVL1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ap4s1Q9WVL1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ap4s1Q9WVL1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ap4s1Q9WVL1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ap4s1Q9WVL1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ap4s1Q9WVL1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ap4s1Q9WVL1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.46■□□□□ 0.71
Ap4s1Q9WVL1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ap4s1Q9WVL1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ap4s1Q9WVL1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ap4s1Q9WVL1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ap4s1Q9WVL1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ap4s1Q9WVL1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Ap4s1Q9WVL1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ap4s1Q9WVL1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.45■□□□□ 0.7
Ap4s1Q9WVL1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.45■□□□□ 0.7
Ap4s1Q9WVL1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ap4s1Q9WVL1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ap4s1Q9WVL1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ap4s1Q9WVL1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ap4s1Q9WVL1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ap4s1Q9WVL1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ap4s1Q9WVL1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.44■□□□□ 0.7
Ap4s1Q9WVL1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ap4s1Q9WVL1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ap4s1Q9WVL1 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.43■□□□□ 0.7
Ap4s1Q9WVL1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ap4s1Q9WVL1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.43■□□□□ 0.7
Ap4s1Q9WVL1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ap4s1Q9WVL1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ap4s1Q9WVL1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ap4s1Q9WVL1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ap4s1Q9WVL1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.42■□□□□ 0.7
Ap4s1Q9WVL1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.42■□□□□ 0.7
Ap4s1Q9WVL1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ap4s1Q9WVL1 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.42■□□□□ 0.7
Ap4s1Q9WVL1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ap4s1Q9WVL1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ap4s1Q9WVL1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Ap4s1Q9WVL1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ap4s1Q9WVL1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
Ap4s1Q9WVL1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ap4s1Q9WVL1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ap4s1Q9WVL1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ap4s1Q9WVL1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ap4s1Q9WVL1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ap4s1Q9WVL1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.4■□□□□ 0.7
Ap4s1Q9WVL1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ap4s1Q9WVL1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ap4s1Q9WVL1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ap4s1Q9WVL1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ap4s1Q9WVL1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ap4s1Q9WVL1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ap4s1Q9WVL1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ap4s1Q9WVL1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ap4s1Q9WVL1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Ap4s1Q9WVL1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ap4s1Q9WVL1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ap4s1Q9WVL1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ap4s1Q9WVL1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ap4s1Q9WVL1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.39■□□□□ 0.69
Ap4s1Q9WVL1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ap4s1Q9WVL1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.39■□□□□ 0.69
Ap4s1Q9WVL1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.39■□□□□ 0.69
Ap4s1Q9WVL1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ap4s1Q9WVL1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ap4s1Q9WVL1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ap4s1Q9WVL1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.38■□□□□ 0.69
Ap4s1Q9WVL1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ap4s1Q9WVL1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ap4s1Q9WVL1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ap4s1Q9WVL1 Gm6311-201ENSMUST00000073790 878 ntBASIC19.38■□□□□ 0.69
Ap4s1Q9WVL1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ap4s1Q9WVL1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Ap4s1Q9WVL1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.38■□□□□ 0.69
Ap4s1Q9WVL1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ap4s1Q9WVL1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ap4s1Q9WVL1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ap4s1Q9WVL1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ap4s1Q9WVL1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ap4s1Q9WVL1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ap4s1Q9WVL1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ap4s1Q9WVL1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ap4s1Q9WVL1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ap4s1Q9WVL1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ap4s1Q9WVL1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ap4s1Q9WVL1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ap4s1Q9WVL1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ap4s1Q9WVL1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ap4s1Q9WVL1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms