Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn8aQ9WTU3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn8aQ9WTU3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scn8aQ9WTU3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn8aQ9WTU3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Scn8aQ9WTU3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn8aQ9WTU3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn8aQ9WTU3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn8aQ9WTU3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn8aQ9WTU3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.72■□□□□ 0.91
Scn8aQ9WTU3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn8aQ9WTU3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn8aQ9WTU3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.72■□□□□ 0.91
Scn8aQ9WTU3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn8aQ9WTU3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Scn8aQ9WTU3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn8aQ9WTU3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Scn8aQ9WTU3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn8aQ9WTU3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.72■□□□□ 0.91
Scn8aQ9WTU3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Scn8aQ9WTU3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn8aQ9WTU3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.71■□□□□ 0.91
Scn8aQ9WTU3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn8aQ9WTU3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Scn8aQ9WTU3 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.71■□□□□ 0.91
Scn8aQ9WTU3 Spcs1-204ENSMUST00000226782 949 ntBASIC20.71■□□□□ 0.91
Scn8aQ9WTU3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn8aQ9WTU3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.71■□□□□ 0.91
Scn8aQ9WTU3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Scn8aQ9WTU3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scn8aQ9WTU3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.7■□□□□ 0.9
Scn8aQ9WTU3 Gm43173-201ENSMUST00000202246 593 ntBASIC20.7■□□□□ 0.9
Scn8aQ9WTU3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scn8aQ9WTU3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scn8aQ9WTU3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scn8aQ9WTU3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn8aQ9WTU3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.7■□□□□ 0.9
Scn8aQ9WTU3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scn8aQ9WTU3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Scn8aQ9WTU3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn8aQ9WTU3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn8aQ9WTU3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn8aQ9WTU3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn8aQ9WTU3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn8aQ9WTU3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Scn8aQ9WTU3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scn8aQ9WTU3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn8aQ9WTU3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn8aQ9WTU3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Scn8aQ9WTU3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn8aQ9WTU3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn8aQ9WTU3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn8aQ9WTU3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn8aQ9WTU3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn8aQ9WTU3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn8aQ9WTU3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Scn8aQ9WTU3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn8aQ9WTU3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn8aQ9WTU3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn8aQ9WTU3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.66■□□□□ 0.9
Scn8aQ9WTU3 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.66■□□□□ 0.9
Scn8aQ9WTU3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scn8aQ9WTU3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn8aQ9WTU3 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.66■□□□□ 0.9
Scn8aQ9WTU3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scn8aQ9WTU3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn8aQ9WTU3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Scn8aQ9WTU3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Scn8aQ9WTU3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn8aQ9WTU3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn8aQ9WTU3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn8aQ9WTU3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn8aQ9WTU3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Scn8aQ9WTU3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn8aQ9WTU3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scn8aQ9WTU3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Scn8aQ9WTU3 Gm6139-201ENSMUST00000079261 882 ntBASIC20.65■□□□□ 0.9
Scn8aQ9WTU3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn8aQ9WTU3 Gm43017-201ENSMUST00000198296 752 ntBASIC20.65■□□□□ 0.9
Scn8aQ9WTU3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.65■□□□□ 0.9
Scn8aQ9WTU3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn8aQ9WTU3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.64■□□□□ 0.9
Scn8aQ9WTU3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Scn8aQ9WTU3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scn8aQ9WTU3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.64■□□□□ 0.89
Scn8aQ9WTU3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.64■□□□□ 0.89
Scn8aQ9WTU3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn8aQ9WTU3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn8aQ9WTU3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn8aQ9WTU3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Scn8aQ9WTU3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn8aQ9WTU3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn8aQ9WTU3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn8aQ9WTU3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.63■□□□□ 0.89
Scn8aQ9WTU3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scn8aQ9WTU3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.63■□□□□ 0.89
Scn8aQ9WTU3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn8aQ9WTU3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
Scn8aQ9WTU3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn8aQ9WTU3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms