Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nubp1Q9R060 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nubp1Q9R060 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Nubp1Q9R060 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.69■□□□□ 0.42
Nubp1Q9R060 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nubp1Q9R060 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nubp1Q9R060 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.69■□□□□ 0.42
Nubp1Q9R060 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Nubp1Q9R060 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC17.69■□□□□ 0.42
Nubp1Q9R060 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.69■□□□□ 0.42
Nubp1Q9R060 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Nubp1Q9R060 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nubp1Q9R060 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nubp1Q9R060 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nubp1Q9R060 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nubp1Q9R060 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nubp1Q9R060 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Nubp1Q9R060 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nubp1Q9R060 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nubp1Q9R060 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.68■□□□□ 0.42
Nubp1Q9R060 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nubp1Q9R060 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nubp1Q9R060 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nubp1Q9R060 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.67■□□□□ 0.42
Nubp1Q9R060 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nubp1Q9R060 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nubp1Q9R060 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nubp1Q9R060 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nubp1Q9R060 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nubp1Q9R060 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nubp1Q9R060 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nubp1Q9R060 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nubp1Q9R060 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nubp1Q9R060 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nubp1Q9R060 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
Nubp1Q9R060 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Nubp1Q9R060 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nubp1Q9R060 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
Nubp1Q9R060 Gm15823-201ENSMUST00000064305 670 ntBASIC17.66■□□□□ 0.42
Nubp1Q9R060 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nubp1Q9R060 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.66■□□□□ 0.42
Nubp1Q9R060 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nubp1Q9R060 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nubp1Q9R060 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nubp1Q9R060 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp1Q9R060 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp1Q9R060 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp1Q9R060 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp1Q9R060 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp1Q9R060 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.65■□□□□ 0.42
Nubp1Q9R060 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nubp1Q9R060 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nubp1Q9R060 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp1Q9R060 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp1Q9R060 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp1Q9R060 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp1Q9R060 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.64■□□□□ 0.41
Nubp1Q9R060 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp1Q9R060 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp1Q9R060 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp1Q9R060 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp1Q9R060 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp1Q9R060 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp1Q9R060 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp1Q9R060 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Nubp1Q9R060 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp1Q9R060 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nubp1Q9R060 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nubp1Q9R060 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.63■□□□□ 0.41
Nubp1Q9R060 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nubp1Q9R060 AV356131-201ENSMUST00000206201 750 ntBASIC17.63■□□□□ 0.41
Nubp1Q9R060 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nubp1Q9R060 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nubp1Q9R060 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nubp1Q9R060 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nubp1Q9R060 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nubp1Q9R060 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nubp1Q9R060 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nubp1Q9R060 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nubp1Q9R060 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.62■□□□□ 0.41
Nubp1Q9R060 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.62■□□□□ 0.41
Nubp1Q9R060 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nubp1Q9R060 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nubp1Q9R060 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nubp1Q9R060 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Nubp1Q9R060 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nubp1Q9R060 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nubp1Q9R060 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.61■□□□□ 0.41
Nubp1Q9R060 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nubp1Q9R060 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nubp1Q9R060 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nubp1Q9R060 Gm12933-201ENSMUST00000120203 872 ntBASIC17.61■□□□□ 0.41
Nubp1Q9R060 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nubp1Q9R060 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.61■□□□□ 0.41
Nubp1Q9R060 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nubp1Q9R060 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nubp1Q9R060 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nubp1Q9R060 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nubp1Q9R060 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.6■□□□□ 0.41
Nubp1Q9R060 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms