Protein–RNA interactions for Protein: Q9QZR0

Rnf25, E3 ubiquitin-protein ligase RNF25, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf25Q9QZR0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf25Q9QZR0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf25Q9QZR0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.69■■□□□ 1.06
Rnf25Q9QZR0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf25Q9QZR0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf25Q9QZR0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rnf25Q9QZR0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf25Q9QZR0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf25Q9QZR0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf25Q9QZR0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf25Q9QZR0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf25Q9QZR0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf25Q9QZR0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf25Q9QZR0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.68■■□□□ 1.06
Rnf25Q9QZR0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.68■■□□□ 1.06
Rnf25Q9QZR0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf25Q9QZR0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf25Q9QZR0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf25Q9QZR0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf25Q9QZR0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf25Q9QZR0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.68■■□□□ 1.06
Rnf25Q9QZR0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf25Q9QZR0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf25Q9QZR0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf25Q9QZR0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.67■■□□□ 1.06
Rnf25Q9QZR0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf25Q9QZR0 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.67■■□□□ 1.06
Rnf25Q9QZR0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf25Q9QZR0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf25Q9QZR0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf25Q9QZR0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Rnf25Q9QZR0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf25Q9QZR0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf25Q9QZR0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf25Q9QZR0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.65■■□□□ 1.06
Rnf25Q9QZR0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf25Q9QZR0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf25Q9QZR0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.65■■□□□ 1.06
Rnf25Q9QZR0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf25Q9QZR0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.64■■□□□ 1.06
Rnf25Q9QZR0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rnf25Q9QZR0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Rnf25Q9QZR0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf25Q9QZR0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rnf25Q9QZR0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Rnf25Q9QZR0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Rnf25Q9QZR0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf25Q9QZR0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.63■■□□□ 1.05
Rnf25Q9QZR0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Rnf25Q9QZR0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf25Q9QZR0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Rnf25Q9QZR0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf25Q9QZR0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf25Q9QZR0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf25Q9QZR0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf25Q9QZR0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.62■■□□□ 1.05
Rnf25Q9QZR0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf25Q9QZR0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf25Q9QZR0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.62■■□□□ 1.05
Rnf25Q9QZR0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rnf25Q9QZR0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf25Q9QZR0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.61■■□□□ 1.05
Rnf25Q9QZR0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf25Q9QZR0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf25Q9QZR0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rnf25Q9QZR0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Rnf25Q9QZR0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
Rnf25Q9QZR0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf25Q9QZR0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf25Q9QZR0 Gm43530-201ENSMUST00000195920 274 ntBASIC21.6■■□□□ 1.05
Rnf25Q9QZR0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.6■■□□□ 1.05
Rnf25Q9QZR0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
Rnf25Q9QZR0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf25Q9QZR0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Rnf25Q9QZR0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf25Q9QZR0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Rnf25Q9QZR0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf25Q9QZR0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf25Q9QZR0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf25Q9QZR0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.59■■□□□ 1.05
Rnf25Q9QZR0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf25Q9QZR0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf25Q9QZR0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf25Q9QZR0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf25Q9QZR0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf25Q9QZR0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf25Q9QZR0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf25Q9QZR0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf25Q9QZR0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf25Q9QZR0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
Rnf25Q9QZR0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.58■■□□□ 1.05
Rnf25Q9QZR0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Rnf25Q9QZR0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf25Q9QZR0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf25Q9QZR0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.58■■□□□ 1.05
Rnf25Q9QZR0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.58■■□□□ 1.05
Rnf25Q9QZR0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Rnf25Q9QZR0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Rnf25Q9QZR0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rnf25Q9QZR0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms