Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Msh5Q9QUM7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh5Q9QUM7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh5Q9QUM7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh5Q9QUM7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.62■□□□□ 0.89
Msh5Q9QUM7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.62■□□□□ 0.89
Msh5Q9QUM7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh5Q9QUM7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Msh5Q9QUM7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh5Q9QUM7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh5Q9QUM7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh5Q9QUM7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh5Q9QUM7 Iqck-206ENSMUST00000208658 2891 ntBASIC20.61■□□□□ 0.89
Msh5Q9QUM7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh5Q9QUM7 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.61■□□□□ 0.89
Msh5Q9QUM7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh5Q9QUM7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Msh5Q9QUM7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh5Q9QUM7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh5Q9QUM7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.6■□□□□ 0.89
Msh5Q9QUM7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh5Q9QUM7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Msh5Q9QUM7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.6■□□□□ 0.89
Msh5Q9QUM7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh5Q9QUM7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.6■□□□□ 0.89
Msh5Q9QUM7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh5Q9QUM7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Msh5Q9QUM7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh5Q9QUM7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh5Q9QUM7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh5Q9QUM7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Msh5Q9QUM7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.59■□□□□ 0.89
Msh5Q9QUM7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh5Q9QUM7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Msh5Q9QUM7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh5Q9QUM7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh5Q9QUM7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Msh5Q9QUM7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Msh5Q9QUM7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Msh5Q9QUM7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Msh5Q9QUM7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Msh5Q9QUM7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Msh5Q9QUM7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.58■□□□□ 0.89
Msh5Q9QUM7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Msh5Q9QUM7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Msh5Q9QUM7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Msh5Q9QUM7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
Msh5Q9QUM7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Msh5Q9QUM7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Msh5Q9QUM7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Msh5Q9QUM7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Msh5Q9QUM7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Msh5Q9QUM7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Msh5Q9QUM7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.57■□□□□ 0.88
Msh5Q9QUM7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Msh5Q9QUM7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.57■□□□□ 0.88
Msh5Q9QUM7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Msh5Q9QUM7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Msh5Q9QUM7 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.57■□□□□ 0.88
Msh5Q9QUM7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Msh5Q9QUM7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Msh5Q9QUM7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Msh5Q9QUM7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Msh5Q9QUM7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Msh5Q9QUM7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Msh5Q9QUM7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Msh5Q9QUM7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Msh5Q9QUM7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Msh5Q9QUM7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Msh5Q9QUM7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Msh5Q9QUM7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Msh5Q9QUM7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Msh5Q9QUM7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Msh5Q9QUM7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh5Q9QUM7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh5Q9QUM7 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.55■□□□□ 0.88
Msh5Q9QUM7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.55■□□□□ 0.88
Msh5Q9QUM7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh5Q9QUM7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.55■□□□□ 0.88
Msh5Q9QUM7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh5Q9QUM7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh5Q9QUM7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh5Q9QUM7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Msh5Q9QUM7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh5Q9QUM7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.54■□□□□ 0.88
Msh5Q9QUM7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh5Q9QUM7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh5Q9QUM7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh5Q9QUM7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Msh5Q9QUM7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh5Q9QUM7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh5Q9QUM7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh5Q9QUM7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh5Q9QUM7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh5Q9QUM7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh5Q9QUM7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh5Q9QUM7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh5Q9QUM7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh5Q9QUM7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Msh5Q9QUM7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 108.3 ms