Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.21■□□□□ 0.51
Sec61a2Q9JLR1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a2Q9JLR1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sec61a2Q9JLR1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sec61a2Q9JLR1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sec61a2Q9JLR1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sec61a2Q9JLR1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sec61a2Q9JLR1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sec61a2Q9JLR1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sec61a2Q9JLR1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sec61a2Q9JLR1 Gm45102-201ENSMUST00000207427 857 ntBASIC18.2■□□□□ 0.5
Sec61a2Q9JLR1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sec61a2Q9JLR1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.2■□□□□ 0.5
Sec61a2Q9JLR1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sec61a2Q9JLR1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sec61a2Q9JLR1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sec61a2Q9JLR1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sec61a2Q9JLR1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.19■□□□□ 0.5
Sec61a2Q9JLR1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
Sec61a2Q9JLR1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Sec61a2Q9JLR1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.19■□□□□ 0.5
Sec61a2Q9JLR1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sec61a2Q9JLR1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Sec61a2Q9JLR1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Sec61a2Q9JLR1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sec61a2Q9JLR1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sec61a2Q9JLR1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Sec61a2Q9JLR1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Sec61a2Q9JLR1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sec61a2Q9JLR1 Etf1-202ENSMUST00000180351 108 ntBASIC18.18■□□□□ 0.5
Sec61a2Q9JLR1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Sec61a2Q9JLR1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sec61a2Q9JLR1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sec61a2Q9JLR1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sec61a2Q9JLR1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sec61a2Q9JLR1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sec61a2Q9JLR1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sec61a2Q9JLR1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sec61a2Q9JLR1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sec61a2Q9JLR1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sec61a2Q9JLR1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.17■□□□□ 0.5
Sec61a2Q9JLR1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.17■□□□□ 0.5
Sec61a2Q9JLR1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sec61a2Q9JLR1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sec61a2Q9JLR1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sec61a2Q9JLR1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.16■□□□□ 0.5
Sec61a2Q9JLR1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sec61a2Q9JLR1 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.16■□□□□ 0.5
Sec61a2Q9JLR1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sec61a2Q9JLR1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.16■□□□□ 0.5
Sec61a2Q9JLR1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.16■□□□□ 0.5
Sec61a2Q9JLR1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.16■□□□□ 0.5
Sec61a2Q9JLR1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.16■□□□□ 0.5
Sec61a2Q9JLR1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sec61a2Q9JLR1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sec61a2Q9JLR1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sec61a2Q9JLR1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sec61a2Q9JLR1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Sec61a2Q9JLR1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sec61a2Q9JLR1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sec61a2Q9JLR1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sec61a2Q9JLR1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sec61a2Q9JLR1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sec61a2Q9JLR1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sec61a2Q9JLR1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sec61a2Q9JLR1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sec61a2Q9JLR1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sec61a2Q9JLR1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sec61a2Q9JLR1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a2Q9JLR1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a2Q9JLR1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Sec61a2Q9JLR1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.13■□□□□ 0.49
Sec61a2Q9JLR1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a2Q9JLR1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sec61a2Q9JLR1 Gm40881-201ENSMUST00000223397 166 ntBASIC18.13■□□□□ 0.49
Sec61a2Q9JLR1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a2Q9JLR1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a2Q9JLR1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a2Q9JLR1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a2Q9JLR1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sec61a2Q9JLR1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sec61a2Q9JLR1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sec61a2Q9JLR1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Sec61a2Q9JLR1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sec61a2Q9JLR1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms