Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Scn5aQ9JJV9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.34■■□□□ 1.01
Scn5aQ9JJV9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Scn5aQ9JJV9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Scn5aQ9JJV9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Scn5aQ9JJV9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scn5aQ9JJV9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scn5aQ9JJV9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Scn5aQ9JJV9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scn5aQ9JJV9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Scn5aQ9JJV9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scn5aQ9JJV9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.32■■□□□ 1
Scn5aQ9JJV9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn5aQ9JJV9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn5aQ9JJV9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn5aQ9JJV9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn5aQ9JJV9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn5aQ9JJV9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn5aQ9JJV9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn5aQ9JJV9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.31■■□□□ 1
Scn5aQ9JJV9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.31■■□□□ 1
Scn5aQ9JJV9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.31■■□□□ 1
Scn5aQ9JJV9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn5aQ9JJV9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Scn5aQ9JJV9 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.31■■□□□ 1
Scn5aQ9JJV9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn5aQ9JJV9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn5aQ9JJV9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.3■■□□□ 1
Scn5aQ9JJV9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn5aQ9JJV9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.3■■□□□ 1
Scn5aQ9JJV9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.3■■□□□ 1
Scn5aQ9JJV9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.3■■□□□ 1
Scn5aQ9JJV9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Scn5aQ9JJV9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Scn5aQ9JJV9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Scn5aQ9JJV9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.3■■□□□ 1
Scn5aQ9JJV9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Scn5aQ9JJV9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.29■■□□□ 1
Scn5aQ9JJV9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn5aQ9JJV9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.29■■□□□ 1
Scn5aQ9JJV9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn5aQ9JJV9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.29■■□□□ 1
Scn5aQ9JJV9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn5aQ9JJV9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Scn5aQ9JJV9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scn5aQ9JJV9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn5aQ9JJV9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.28■■□□□ 1
Scn5aQ9JJV9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Scn5aQ9JJV9 Gm27011-201ENSMUST00000182352 972 ntBASIC21.28■■□□□ 1
Scn5aQ9JJV9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.28■■□□□ 1
Scn5aQ9JJV9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scn5aQ9JJV9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.28■■□□□ 1
Scn5aQ9JJV9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.28■■□□□ 1
Scn5aQ9JJV9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn5aQ9JJV9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scn5aQ9JJV9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Scn5aQ9JJV9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn5aQ9JJV9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Scn5aQ9JJV9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Scn5aQ9JJV9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.26■□□□□ 0.99
Scn5aQ9JJV9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scn5aQ9JJV9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Scn5aQ9JJV9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scn5aQ9JJV9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scn5aQ9JJV9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Scn5aQ9JJV9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.26■□□□□ 0.99
Scn5aQ9JJV9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn5aQ9JJV9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn5aQ9JJV9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn5aQ9JJV9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn5aQ9JJV9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn5aQ9JJV9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.25■□□□□ 0.99
Scn5aQ9JJV9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn5aQ9JJV9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Scn5aQ9JJV9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn5aQ9JJV9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Scn5aQ9JJV9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn5aQ9JJV9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn5aQ9JJV9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn5aQ9JJV9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Scn5aQ9JJV9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.24■□□□□ 0.99
Scn5aQ9JJV9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.24■□□□□ 0.99
Scn5aQ9JJV9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn5aQ9JJV9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn5aQ9JJV9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.24■□□□□ 0.99
Scn5aQ9JJV9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Scn5aQ9JJV9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn5aQ9JJV9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn5aQ9JJV9 Gm11421-201ENSMUST00000122124 294 ntBASIC21.24■□□□□ 0.99
Scn5aQ9JJV9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Scn5aQ9JJV9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scn5aQ9JJV9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn5aQ9JJV9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn5aQ9JJV9 AV356131-201ENSMUST00000206201 750 ntBASIC21.23■□□□□ 0.99
Scn5aQ9JJV9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn5aQ9JJV9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scn5aQ9JJV9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn5aQ9JJV9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scn5aQ9JJV9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.22■□□□□ 0.99
Scn5aQ9JJV9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms