Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim39Q9ESN2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim39Q9ESN2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim39Q9ESN2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.82■□□□□ 0.6
Trim39Q9ESN2 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.82■□□□□ 0.6
Trim39Q9ESN2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim39Q9ESN2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim39Q9ESN2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim39Q9ESN2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim39Q9ESN2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim39Q9ESN2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim39Q9ESN2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim39Q9ESN2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim39Q9ESN2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim39Q9ESN2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Trim39Q9ESN2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim39Q9ESN2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim39Q9ESN2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim39Q9ESN2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim39Q9ESN2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim39Q9ESN2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim39Q9ESN2 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.8■□□□□ 0.6
Trim39Q9ESN2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim39Q9ESN2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim39Q9ESN2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim39Q9ESN2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim39Q9ESN2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim39Q9ESN2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim39Q9ESN2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim39Q9ESN2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim39Q9ESN2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim39Q9ESN2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Trim39Q9ESN2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim39Q9ESN2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Trim39Q9ESN2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim39Q9ESN2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim39Q9ESN2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim39Q9ESN2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim39Q9ESN2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim39Q9ESN2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim39Q9ESN2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim39Q9ESN2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim39Q9ESN2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim39Q9ESN2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim39Q9ESN2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim39Q9ESN2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim39Q9ESN2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim39Q9ESN2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim39Q9ESN2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
Trim39Q9ESN2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trim39Q9ESN2 Gm10232-201ENSMUST00000089221 720 ntBASIC18.77■□□□□ 0.6
Trim39Q9ESN2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim39Q9ESN2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim39Q9ESN2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim39Q9ESN2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim39Q9ESN2 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.76■□□□□ 0.59
Trim39Q9ESN2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim39Q9ESN2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim39Q9ESN2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim39Q9ESN2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim39Q9ESN2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim39Q9ESN2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim39Q9ESN2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim39Q9ESN2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim39Q9ESN2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim39Q9ESN2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.76■□□□□ 0.59
Trim39Q9ESN2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim39Q9ESN2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim39Q9ESN2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim39Q9ESN2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim39Q9ESN2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim39Q9ESN2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim39Q9ESN2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim39Q9ESN2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim39Q9ESN2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim39Q9ESN2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim39Q9ESN2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim39Q9ESN2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim39Q9ESN2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim39Q9ESN2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trim39Q9ESN2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim39Q9ESN2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim39Q9ESN2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim39Q9ESN2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim39Q9ESN2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim39Q9ESN2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim39Q9ESN2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim39Q9ESN2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim39Q9ESN2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Trim39Q9ESN2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trim39Q9ESN2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
Trim39Q9ESN2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim39Q9ESN2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim39Q9ESN2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim39Q9ESN2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim39Q9ESN2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim39Q9ESN2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim39Q9ESN2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.72■□□□□ 0.59
Trim39Q9ESN2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim39Q9ESN2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms