Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Vps35Q9EQH3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps35Q9EQH3 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.29■□□□□ 0.84
Vps35Q9EQH3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps35Q9EQH3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.29■□□□□ 0.84
Vps35Q9EQH3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.29■□□□□ 0.84
Vps35Q9EQH3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Vps35Q9EQH3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps35Q9EQH3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vps35Q9EQH3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps35Q9EQH3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Vps35Q9EQH3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps35Q9EQH3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vps35Q9EQH3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Vps35Q9EQH3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps35Q9EQH3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps35Q9EQH3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps35Q9EQH3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps35Q9EQH3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.28■□□□□ 0.84
Vps35Q9EQH3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps35Q9EQH3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps35Q9EQH3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps35Q9EQH3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps35Q9EQH3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vps35Q9EQH3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.27■□□□□ 0.84
Vps35Q9EQH3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps35Q9EQH3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps35Q9EQH3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps35Q9EQH3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vps35Q9EQH3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Vps35Q9EQH3 Gm7143-201ENSMUST00000222811 859 ntBASIC20.27■□□□□ 0.84
Vps35Q9EQH3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.27■□□□□ 0.83
Vps35Q9EQH3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vps35Q9EQH3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Vps35Q9EQH3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps35Q9EQH3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps35Q9EQH3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vps35Q9EQH3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Vps35Q9EQH3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps35Q9EQH3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.25■□□□□ 0.83
Vps35Q9EQH3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.25■□□□□ 0.83
Vps35Q9EQH3 Gm9870-201ENSMUST00000063874 645 ntBASIC20.25■□□□□ 0.83
Vps35Q9EQH3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps35Q9EQH3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps35Q9EQH3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps35Q9EQH3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps35Q9EQH3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vps35Q9EQH3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Vps35Q9EQH3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Vps35Q9EQH3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps35Q9EQH3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.24■□□□□ 0.83
Vps35Q9EQH3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps35Q9EQH3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps35Q9EQH3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps35Q9EQH3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps35Q9EQH3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps35Q9EQH3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Vps35Q9EQH3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Vps35Q9EQH3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps35Q9EQH3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vps35Q9EQH3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.23■□□□□ 0.83
Vps35Q9EQH3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps35Q9EQH3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps35Q9EQH3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Vps35Q9EQH3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps35Q9EQH3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps35Q9EQH3 Gm12922-201ENSMUST00000120626 809 ntBASIC20.22■□□□□ 0.83
Vps35Q9EQH3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps35Q9EQH3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
Vps35Q9EQH3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps35Q9EQH3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vps35Q9EQH3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps35Q9EQH3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps35Q9EQH3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vps35Q9EQH3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.21■□□□□ 0.83
Vps35Q9EQH3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps35Q9EQH3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps35Q9EQH3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps35Q9EQH3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.21■□□□□ 0.83
Vps35Q9EQH3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vps35Q9EQH3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps35Q9EQH3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps35Q9EQH3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps35Q9EQH3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps35Q9EQH3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Vps35Q9EQH3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.2■□□□□ 0.82
Vps35Q9EQH3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.2■□□□□ 0.82
Vps35Q9EQH3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Vps35Q9EQH3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps35Q9EQH3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vps35Q9EQH3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.2■□□□□ 0.82
Vps35Q9EQH3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps35Q9EQH3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps35Q9EQH3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps35Q9EQH3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.18■□□□□ 0.82
Vps35Q9EQH3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps35Q9EQH3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps35Q9EQH3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.18■□□□□ 0.82
Vps35Q9EQH3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps35Q9EQH3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms