Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp1bQ9EPL6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp1bQ9EPL6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.86■□□□□ 0.45
Mmp1bQ9EPL6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp1bQ9EPL6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.86■□□□□ 0.45
Mmp1bQ9EPL6 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.86■□□□□ 0.45
Mmp1bQ9EPL6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp1bQ9EPL6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Mmp1bQ9EPL6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Mmp1bQ9EPL6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Mmp1bQ9EPL6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp1bQ9EPL6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp1bQ9EPL6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp1bQ9EPL6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp1bQ9EPL6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp1bQ9EPL6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp1bQ9EPL6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp1bQ9EPL6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp1bQ9EPL6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp1bQ9EPL6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp1bQ9EPL6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp1bQ9EPL6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp1bQ9EPL6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp1bQ9EPL6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp1bQ9EPL6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp1bQ9EPL6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Mmp1bQ9EPL6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.84■□□□□ 0.45
Mmp1bQ9EPL6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp1bQ9EPL6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp1bQ9EPL6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp1bQ9EPL6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp1bQ9EPL6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp1bQ9EPL6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp1bQ9EPL6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp1bQ9EPL6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp1bQ9EPL6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp1bQ9EPL6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.83■□□□□ 0.44
Mmp1bQ9EPL6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.83■□□□□ 0.44
Mmp1bQ9EPL6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp1bQ9EPL6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp1bQ9EPL6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Mmp1bQ9EPL6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp1bQ9EPL6 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.83■□□□□ 0.44
Mmp1bQ9EPL6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Mmp1bQ9EPL6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp1bQ9EPL6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp1bQ9EPL6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp1bQ9EPL6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp1bQ9EPL6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp1bQ9EPL6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.82■□□□□ 0.44
Mmp1bQ9EPL6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.82■□□□□ 0.44
Mmp1bQ9EPL6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp1bQ9EPL6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp1bQ9EPL6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Mmp1bQ9EPL6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.82■□□□□ 0.44
Mmp1bQ9EPL6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp1bQ9EPL6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.81■□□□□ 0.44
Mmp1bQ9EPL6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp1bQ9EPL6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp1bQ9EPL6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp1bQ9EPL6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.8■□□□□ 0.44
Mmp1bQ9EPL6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp1bQ9EPL6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.8■□□□□ 0.44
Mmp1bQ9EPL6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Mmp1bQ9EPL6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp1bQ9EPL6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.8■□□□□ 0.44
Mmp1bQ9EPL6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.8■□□□□ 0.44
Mmp1bQ9EPL6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp1bQ9EPL6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp1bQ9EPL6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp1bQ9EPL6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp1bQ9EPL6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp1bQ9EPL6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp1bQ9EPL6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp1bQ9EPL6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Mmp1bQ9EPL6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Mmp1bQ9EPL6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp1bQ9EPL6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp1bQ9EPL6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp1bQ9EPL6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp1bQ9EPL6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp1bQ9EPL6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.78■□□□□ 0.44
Mmp1bQ9EPL6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp1bQ9EPL6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp1bQ9EPL6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp1bQ9EPL6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms