Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.87■□□□□ 0.93
Nop56Q9D6Z1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Nop56Q9D6Z1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nop56Q9D6Z1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.87■□□□□ 0.93
Nop56Q9D6Z1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.86■□□□□ 0.93
Nop56Q9D6Z1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nop56Q9D6Z1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.86■□□□□ 0.93
Nop56Q9D6Z1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nop56Q9D6Z1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nop56Q9D6Z1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nop56Q9D6Z1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nop56Q9D6Z1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Nop56Q9D6Z1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop56Q9D6Z1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop56Q9D6Z1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.85■□□□□ 0.93
Nop56Q9D6Z1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop56Q9D6Z1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop56Q9D6Z1 Gm27502-201ENSMUST00000183495 199 ntBASIC20.85■□□□□ 0.93
Nop56Q9D6Z1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop56Q9D6Z1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop56Q9D6Z1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop56Q9D6Z1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nop56Q9D6Z1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nop56Q9D6Z1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nop56Q9D6Z1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nop56Q9D6Z1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop56Q9D6Z1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop56Q9D6Z1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop56Q9D6Z1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.84■□□□□ 0.93
Nop56Q9D6Z1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Nop56Q9D6Z1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop56Q9D6Z1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Nop56Q9D6Z1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nop56Q9D6Z1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nop56Q9D6Z1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nop56Q9D6Z1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nop56Q9D6Z1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nop56Q9D6Z1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nop56Q9D6Z1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Nop56Q9D6Z1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nop56Q9D6Z1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nop56Q9D6Z1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nop56Q9D6Z1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nop56Q9D6Z1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nop56Q9D6Z1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nop56Q9D6Z1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nop56Q9D6Z1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nop56Q9D6Z1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.82■□□□□ 0.92
Nop56Q9D6Z1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nop56Q9D6Z1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nop56Q9D6Z1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nop56Q9D6Z1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nop56Q9D6Z1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nop56Q9D6Z1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nop56Q9D6Z1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nop56Q9D6Z1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nop56Q9D6Z1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nop56Q9D6Z1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.81■□□□□ 0.92
Nop56Q9D6Z1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nop56Q9D6Z1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nop56Q9D6Z1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nop56Q9D6Z1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nop56Q9D6Z1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nop56Q9D6Z1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nop56Q9D6Z1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nop56Q9D6Z1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nop56Q9D6Z1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.79■□□□□ 0.92
Nop56Q9D6Z1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nop56Q9D6Z1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nop56Q9D6Z1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nop56Q9D6Z1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nop56Q9D6Z1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Nop56Q9D6Z1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nop56Q9D6Z1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nop56Q9D6Z1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.78■□□□□ 0.92
Nop56Q9D6Z1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.78■□□□□ 0.92
Nop56Q9D6Z1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Nop56Q9D6Z1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nop56Q9D6Z1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.78■□□□□ 0.92
Nop56Q9D6Z1 Gm14523-201ENSMUST00000117260 558 ntBASIC20.78■□□□□ 0.92
Nop56Q9D6Z1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nop56Q9D6Z1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nop56Q9D6Z1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nop56Q9D6Z1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nop56Q9D6Z1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nop56Q9D6Z1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nop56Q9D6Z1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nop56Q9D6Z1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nop56Q9D6Z1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nop56Q9D6Z1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nop56Q9D6Z1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Nop56Q9D6Z1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nop56Q9D6Z1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.77■□□□□ 0.92
Nop56Q9D6Z1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.77■□□□□ 0.91
Nop56Q9D6Z1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nop56Q9D6Z1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.76■□□□□ 0.91
Nop56Q9D6Z1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nop56Q9D6Z1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Nop56Q9D6Z1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.76■□□□□ 0.91
Nop56Q9D6Z1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms