Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Gm11599-201ENSMUST00000118720 878 ntBASIC18.53■□□□□ 0.56
Ift27Q9D0P8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.53■□□□□ 0.56
Ift27Q9D0P8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift27Q9D0P8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift27Q9D0P8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift27Q9D0P8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ift27Q9D0P8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift27Q9D0P8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift27Q9D0P8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift27Q9D0P8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift27Q9D0P8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.53■□□□□ 0.56
Ift27Q9D0P8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ift27Q9D0P8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ift27Q9D0P8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ift27Q9D0P8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ift27Q9D0P8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ift27Q9D0P8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ift27Q9D0P8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ift27Q9D0P8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ift27Q9D0P8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift27Q9D0P8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift27Q9D0P8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift27Q9D0P8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ift27Q9D0P8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.51■□□□□ 0.55
Ift27Q9D0P8 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.51■□□□□ 0.55
Ift27Q9D0P8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ift27Q9D0P8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift27Q9D0P8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ift27Q9D0P8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ift27Q9D0P8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift27Q9D0P8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift27Q9D0P8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ift27Q9D0P8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ift27Q9D0P8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift27Q9D0P8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift27Q9D0P8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ift27Q9D0P8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ift27Q9D0P8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift27Q9D0P8 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.49■□□□□ 0.55
Ift27Q9D0P8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Ift27Q9D0P8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.49■□□□□ 0.55
Ift27Q9D0P8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift27Q9D0P8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift27Q9D0P8 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.49■□□□□ 0.55
Ift27Q9D0P8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift27Q9D0P8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift27Q9D0P8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ift27Q9D0P8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift27Q9D0P8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ift27Q9D0P8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ift27Q9D0P8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift27Q9D0P8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift27Q9D0P8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ift27Q9D0P8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ift27Q9D0P8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.48■□□□□ 0.55
Ift27Q9D0P8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.48■□□□□ 0.55
Ift27Q9D0P8 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.48■□□□□ 0.55
Ift27Q9D0P8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift27Q9D0P8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift27Q9D0P8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ift27Q9D0P8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.47■□□□□ 0.55
Ift27Q9D0P8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ift27Q9D0P8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.47■□□□□ 0.55
Ift27Q9D0P8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ift27Q9D0P8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ift27Q9D0P8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift27Q9D0P8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift27Q9D0P8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ift27Q9D0P8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift27Q9D0P8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ift27Q9D0P8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift27Q9D0P8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift27Q9D0P8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift27Q9D0P8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift27Q9D0P8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ift27Q9D0P8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.45■□□□□ 0.54
Ift27Q9D0P8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ift27Q9D0P8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.45■□□□□ 0.54
Ift27Q9D0P8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ift27Q9D0P8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.45■□□□□ 0.54
Ift27Q9D0P8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Ift27Q9D0P8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift27Q9D0P8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift27Q9D0P8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Ift27Q9D0P8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms