Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Lysmd1Q9D0E3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Lysmd1Q9D0E3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.36■■□□□ 1.17
Lysmd1Q9D0E3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Lysmd1Q9D0E3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Lysmd1Q9D0E3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Lysmd1Q9D0E3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Lysmd1Q9D0E3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.36■■□□□ 1.17
Lysmd1Q9D0E3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lysmd1Q9D0E3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Lysmd1Q9D0E3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lysmd1Q9D0E3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Lysmd1Q9D0E3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Lysmd1Q9D0E3 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.35■■□□□ 1.17
Lysmd1Q9D0E3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.35■■□□□ 1.17
Lysmd1Q9D0E3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lysmd1Q9D0E3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.35■■□□□ 1.17
Lysmd1Q9D0E3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Lysmd1Q9D0E3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lysmd1Q9D0E3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lysmd1Q9D0E3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Lysmd1Q9D0E3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC22.34■■□□□ 1.17
Lysmd1Q9D0E3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lysmd1Q9D0E3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lysmd1Q9D0E3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lysmd1Q9D0E3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.33■■□□□ 1.17
Lysmd1Q9D0E3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Lysmd1Q9D0E3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lysmd1Q9D0E3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Lysmd1Q9D0E3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lysmd1Q9D0E3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lysmd1Q9D0E3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC22.32■■□□□ 1.16
Lysmd1Q9D0E3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.32■■□□□ 1.16
Lysmd1Q9D0E3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lysmd1Q9D0E3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC22.31■■□□□ 1.16
Lysmd1Q9D0E3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lysmd1Q9D0E3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lysmd1Q9D0E3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Lysmd1Q9D0E3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lysmd1Q9D0E3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lysmd1Q9D0E3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lysmd1Q9D0E3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lysmd1Q9D0E3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC22.3■■□□□ 1.16
Lysmd1Q9D0E3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Lysmd1Q9D0E3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lysmd1Q9D0E3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lysmd1Q9D0E3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lysmd1Q9D0E3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lysmd1Q9D0E3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lysmd1Q9D0E3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lysmd1Q9D0E3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lysmd1Q9D0E3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lysmd1Q9D0E3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lysmd1Q9D0E3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC22.28■■□□□ 1.16
Lysmd1Q9D0E3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Lysmd1Q9D0E3 Gm11643-201ENSMUST00000119578 864 ntBASIC22.28■■□□□ 1.16
Lysmd1Q9D0E3 Gm6576-201ENSMUST00000169678 883 ntBASIC22.28■■□□□ 1.16
Lysmd1Q9D0E3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Lysmd1Q9D0E3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC22.28■■□□□ 1.16
Lysmd1Q9D0E3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Lysmd1Q9D0E3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Lysmd1Q9D0E3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.28■■□□□ 1.16
Lysmd1Q9D0E3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Lysmd1Q9D0E3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Lysmd1Q9D0E3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lysmd1Q9D0E3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.27■■□□□ 1.16
Lysmd1Q9D0E3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Lysmd1Q9D0E3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.27■■□□□ 1.16
Lysmd1Q9D0E3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.27■■□□□ 1.16
Lysmd1Q9D0E3 Gm10819-201ENSMUST00000099988 561 ntBASIC22.27■■□□□ 1.16
Lysmd1Q9D0E3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Lysmd1Q9D0E3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Lysmd1Q9D0E3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lysmd1Q9D0E3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lysmd1Q9D0E3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.26■■□□□ 1.15
Lysmd1Q9D0E3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Lysmd1Q9D0E3 Arhgef33-211ENSMUST00000225658 473 ntBASIC22.26■■□□□ 1.15
Lysmd1Q9D0E3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Lysmd1Q9D0E3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lysmd1Q9D0E3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lysmd1Q9D0E3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC22.25■■□□□ 1.15
Lysmd1Q9D0E3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Lysmd1Q9D0E3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.25■■□□□ 1.15
Lysmd1Q9D0E3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lysmd1Q9D0E3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lysmd1Q9D0E3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Lysmd1Q9D0E3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Lysmd1Q9D0E3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Lysmd1Q9D0E3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lysmd1Q9D0E3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC22.24■■□□□ 1.15
Lysmd1Q9D0E3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Lysmd1Q9D0E3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Lysmd1Q9D0E3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lysmd1Q9D0E3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lysmd1Q9D0E3 Amer2-203ENSMUST00000225247 2662 ntBASIC22.24■■□□□ 1.15
Lysmd1Q9D0E3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lysmd1Q9D0E3 Gm7290-201ENSMUST00000104990 617 ntBASIC22.23■■□□□ 1.15
Lysmd1Q9D0E3 Gm12918-201ENSMUST00000120234 636 ntBASIC22.23■■□□□ 1.15
Lysmd1Q9D0E3 Gm15710-201ENSMUST00000121821 636 ntBASIC22.23■■□□□ 1.15
Lysmd1Q9D0E3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms