Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ssbp3Q9D032 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Ssbp3Q9D032 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssbp3Q9D032 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ssbp3Q9D032 Gm12821-201ENSMUST00000120022 600 ntBASIC16.88■□□□□ 0.29
Ssbp3Q9D032 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Ssbp3Q9D032 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.88■□□□□ 0.29
Ssbp3Q9D032 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ssbp3Q9D032 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.88■□□□□ 0.29
Ssbp3Q9D032 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.88■□□□□ 0.29
Ssbp3Q9D032 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.88■□□□□ 0.29
Ssbp3Q9D032 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssbp3Q9D032 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ssbp3Q9D032 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ssbp3Q9D032 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.87■□□□□ 0.29
Ssbp3Q9D032 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssbp3Q9D032 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssbp3Q9D032 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ssbp3Q9D032 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ssbp3Q9D032 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ssbp3Q9D032 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssbp3Q9D032 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssbp3Q9D032 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssbp3Q9D032 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssbp3Q9D032 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.86■□□□□ 0.29
Ssbp3Q9D032 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssbp3Q9D032 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ssbp3Q9D032 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssbp3Q9D032 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ssbp3Q9D032 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssbp3Q9D032 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.85■□□□□ 0.29
Ssbp3Q9D032 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssbp3Q9D032 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ssbp3Q9D032 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ssbp3Q9D032 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.85■□□□□ 0.29
Ssbp3Q9D032 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssbp3Q9D032 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssbp3Q9D032 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssbp3Q9D032 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ssbp3Q9D032 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ssbp3Q9D032 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ssbp3Q9D032 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssbp3Q9D032 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssbp3Q9D032 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ssbp3Q9D032 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssbp3Q9D032 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ssbp3Q9D032 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ssbp3Q9D032 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssbp3Q9D032 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
Ssbp3Q9D032 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ssbp3Q9D032 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Ssbp3Q9D032 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssbp3Q9D032 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssbp3Q9D032 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ssbp3Q9D032 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ssbp3Q9D032 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssbp3Q9D032 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssbp3Q9D032 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssbp3Q9D032 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssbp3Q9D032 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssbp3Q9D032 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssbp3Q9D032 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.81■□□□□ 0.28
Ssbp3Q9D032 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssbp3Q9D032 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.81■□□□□ 0.28
Ssbp3Q9D032 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ssbp3Q9D032 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.81■□□□□ 0.28
Ssbp3Q9D032 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.81■□□□□ 0.28
Ssbp3Q9D032 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
Ssbp3Q9D032 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssbp3Q9D032 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssbp3Q9D032 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssbp3Q9D032 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssbp3Q9D032 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssbp3Q9D032 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssbp3Q9D032 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssbp3Q9D032 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssbp3Q9D032 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssbp3Q9D032 Gm27454-201ENSMUST00000185090 204 ntBASIC16.8■□□□□ 0.28
Ssbp3Q9D032 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ssbp3Q9D032 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssbp3Q9D032 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ssbp3Q9D032 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms