Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim13Q9CYB0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim13Q9CYB0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim13Q9CYB0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim13Q9CYB0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim13Q9CYB0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim13Q9CYB0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim13Q9CYB0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim13Q9CYB0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim13Q9CYB0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim13Q9CYB0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim13Q9CYB0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim13Q9CYB0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Trim13Q9CYB0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim13Q9CYB0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim13Q9CYB0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.67■□□□□ 0.58
Trim13Q9CYB0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim13Q9CYB0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim13Q9CYB0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim13Q9CYB0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim13Q9CYB0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim13Q9CYB0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim13Q9CYB0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim13Q9CYB0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim13Q9CYB0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim13Q9CYB0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim13Q9CYB0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim13Q9CYB0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim13Q9CYB0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim13Q9CYB0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim13Q9CYB0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim13Q9CYB0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim13Q9CYB0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim13Q9CYB0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim13Q9CYB0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim13Q9CYB0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim13Q9CYB0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim13Q9CYB0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.64■□□□□ 0.57
Trim13Q9CYB0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim13Q9CYB0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim13Q9CYB0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim13Q9CYB0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim13Q9CYB0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim13Q9CYB0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim13Q9CYB0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim13Q9CYB0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trim13Q9CYB0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim13Q9CYB0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim13Q9CYB0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim13Q9CYB0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trim13Q9CYB0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim13Q9CYB0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim13Q9CYB0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms