Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Khdc3Q9CWU5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Khdc3Q9CWU5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Khdc3Q9CWU5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Khdc3Q9CWU5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Khdc3Q9CWU5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.45■□□□□ 0.7
Khdc3Q9CWU5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Khdc3Q9CWU5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Khdc3Q9CWU5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Khdc3Q9CWU5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Khdc3Q9CWU5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Khdc3Q9CWU5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Khdc3Q9CWU5 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.44■□□□□ 0.7
Khdc3Q9CWU5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.44■□□□□ 0.7
Khdc3Q9CWU5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Khdc3Q9CWU5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Khdc3Q9CWU5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Khdc3Q9CWU5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Khdc3Q9CWU5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Khdc3Q9CWU5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Khdc3Q9CWU5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Khdc3Q9CWU5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Khdc3Q9CWU5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Khdc3Q9CWU5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Khdc3Q9CWU5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Khdc3Q9CWU5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.43■□□□□ 0.7
Khdc3Q9CWU5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Khdc3Q9CWU5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Khdc3Q9CWU5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.42■□□□□ 0.7
Khdc3Q9CWU5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Khdc3Q9CWU5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Khdc3Q9CWU5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.42■□□□□ 0.7
Khdc3Q9CWU5 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.42■□□□□ 0.7
Khdc3Q9CWU5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Khdc3Q9CWU5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Khdc3Q9CWU5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Khdc3Q9CWU5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Khdc3Q9CWU5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Khdc3Q9CWU5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc3Q9CWU5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Khdc3Q9CWU5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc3Q9CWU5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc3Q9CWU5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc3Q9CWU5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc3Q9CWU5 Etf1-202ENSMUST00000180351 108 ntBASIC19.41■□□□□ 0.7
Khdc3Q9CWU5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.41■□□□□ 0.7
Khdc3Q9CWU5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc3Q9CWU5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc3Q9CWU5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc3Q9CWU5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.41■□□□□ 0.7
Khdc3Q9CWU5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Khdc3Q9CWU5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Khdc3Q9CWU5 Gm7417-201ENSMUST00000192950 473 ntBASIC19.4■□□□□ 0.7
Khdc3Q9CWU5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Khdc3Q9CWU5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Khdc3Q9CWU5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Khdc3Q9CWU5 Gm9959-201ENSMUST00000068277 390 ntBASIC19.39■□□□□ 0.69
Khdc3Q9CWU5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Khdc3Q9CWU5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Khdc3Q9CWU5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Khdc3Q9CWU5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Khdc3Q9CWU5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.39■□□□□ 0.69
Khdc3Q9CWU5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Khdc3Q9CWU5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Khdc3Q9CWU5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Khdc3Q9CWU5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Khdc3Q9CWU5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Khdc3Q9CWU5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Khdc3Q9CWU5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Khdc3Q9CWU5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Khdc3Q9CWU5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.38■□□□□ 0.69
Khdc3Q9CWU5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Khdc3Q9CWU5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Khdc3Q9CWU5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Khdc3Q9CWU5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Khdc3Q9CWU5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Khdc3Q9CWU5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Khdc3Q9CWU5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Khdc3Q9CWU5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Khdc3Q9CWU5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Khdc3Q9CWU5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Khdc3Q9CWU5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Khdc3Q9CWU5 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.37■□□□□ 0.69
Khdc3Q9CWU5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Khdc3Q9CWU5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Khdc3Q9CWU5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Khdc3Q9CWU5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Khdc3Q9CWU5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Khdc3Q9CWU5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Khdc3Q9CWU5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Khdc3Q9CWU5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Khdc3Q9CWU5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Khdc3Q9CWU5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Khdc3Q9CWU5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Khdc3Q9CWU5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Khdc3Q9CWU5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc3Q9CWU5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc3Q9CWU5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc3Q9CWU5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc3Q9CWU5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms